Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016402 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 18897556 ~ 18901581 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016402 | True | 354 | mRNA | 0.50 | 2 | 18897556 | 18901581 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016401 | NA | coding | downstream | 461528 | 18420753 ~ 18436028 (-) |
| AMCG00016400 | NA | coding | downstream | 497798 | 18380464 ~ 18399758 (-) |
| AMCG00016399 | grm5a,LOC108423821,LOC107693909,LOC107720647,LOC107556864,LOC107701127,LOC107555132 | coding | downstream | 548179 | 18330193 ~ 18349377 (-) |
| AMCG00016398 | grm5 | coding | downstream | 604697 | 18274230 ~ 18292859 (-) |
| AMCG00016396 | NA | coding | downstream | 635358 | 18259160 ~ 18262198 (-) |
| AMCG00016403 | NA | coding | upstream | 104502 | 19006083 ~ 19014749 (-) |
| AMCG00016404 | NA | coding | upstream | 124257 | 19025838 ~ 19039504 (-) |
| AMCG00016409 | NA | coding | upstream | 207561 | 19109142 ~ 19143518 (-) |
| AMCG00016410 | NA | coding | upstream | 253753 | 19155334 ~ 19161728 (-) |
| AMCG00016414 | NA | coding | upstream | 283357 | 19184938 ~ 19205594 (-) |
| G13254 | NA | non-coding | downstream | 731786 | 18162787 ~ 18165770 (-) |
| G13129 | NA | non-coding | downstream | 1401209 | 17495923 ~ 17496347 (-) |
| G13126 | NA | non-coding | downstream | 1403210 | 17493855 ~ 17494346 (-) |
| G13091 | NA | non-coding | downstream | 1520017 | 17375266 ~ 17377539 (-) |
| G13065 | clns1a,LOC102781126 | non-coding | downstream | 1610727 | 17284403 ~ 17286829 (-) |
| G13339 | NA | non-coding | upstream | 156824 | 19058405 ~ 19058673 (-) |
| G13341 | NA | non-coding | upstream | 175787 | 19077368 ~ 19077823 (-) |
| G13366 | NA | non-coding | upstream | 186643 | 19088224 ~ 19088632 (-) |
| G13392 | NA | non-coding | upstream | 264005 | 19165586 ~ 19253414 (-) |
| G13413 | NA | non-coding | upstream | 355057 | 19256638 ~ 19256919 (-) |
| AMCG00016376 | NA | other | downstream | 1356214 | 17538034 ~ 17541342 (-) |
| AMCG00016360 | aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 | other | downstream | 1630809 | 17263601 ~ 17266747 (-) |
| AMCG00016345 | NA | other | downstream | 2027554 | 16866318 ~ 16870002 (-) |
| G12945 | ucp2,ucp2b,LOC106567822 | other | downstream | 2036377 | 16858541 ~ 16861179 (-) |
| AMCG00016327 | NA | other | downstream | 2422386 | 16470611 ~ 16475170 (-) |
| G13367 | NA | other | upstream | 189658 | 19091239 ~ 19105381 (-) |
| AMCG00016453 | NA | other | upstream | 1227327 | 20128908 ~ 20135547 (-) |
| AMCG00016479 | NA | other | upstream | 1714928 | 20616509 ~ 20636960 (-) |
| AMCG00016480 | NA | other | upstream | 1764561 | 20666142 ~ 20683024 (-) |
| G13962 | NA | other | upstream | 4553511 | 23455092 ~ 23455811 (-) |
