AMCG00016410


Basic Information

Item Value
gene id AMCG00016410
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 19155334 ~ 19161728 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016410
TTGTGTTTGAGGAAAGGGACCTTTCTACGAGACGTTCTATGCAGGCGTTTAGATGGACGTTGTATTCTAATGAGGGCTCTGAGCTTATGGACTACTTACATTCACTTACTGGTCTTCATAACAAGCTACATGGGCTTTTGGCTGCCGGTTCAAGCGCTCACCATAACAACCCCTCAGCTCAGAATCAATGCCTTGGCACAGGACGATGTGCTTTTCTCTACGCAATACTGGTTCCAAGGAACTCCCACCATCCACTGGAGATTCATGTCCCTGTGGAGGAACCAGGACATTGCGGTGTGGCAGCCAGATGTGTATGAGAACATCTCAGAGCCTTACAAGGACAGACTGTACACGTATTACAATGGCTCCATTATGCTCCTGGATGTAGGCGTGAAAGACTCTGGTTTCTATGTGATGACCGTGACAGAGCCTTCGGGAATTAGTAAGGACTCCATTATCATATTGAAAGTTTTTGAGAAACTCTATGAGGACTTGCCTTTTTTAATAGTCTTCGGGATGGTCCTTGCATCTATAGCAGGattattcatgattttaatgTGGTTTTTGGACAAAACTGTACATCTGGTGAAGAGGAGAAGGAAACAAAGAgAACTAGAGGAGGTGGAGCTGCAGCCTCTGGGATCTGAGGTACCTCAAGGTCCCAGTCATTAAAGAAAAACTTGACAACAAAAGTCAACAAGAGTCCTGTGGAGAGGCAGTGACGTTTCAAGCTTGCAGGAGGAAGCTGTATGCTTGGATTCGATGAGGAGAGGATTTGCTTTTGCACATCAAGCAGAATGATGGGATGACGAAGAAAAGCAAAGTCATCTCATTTCCTCGTATGAAAAAGTGGAATCCTGTTGAGGAATATAAAGGATATGCATACATCGTTTCTATGTACGAGGAGCAAGCAGGCACAGAAAgcaaattattgttatttcacCTTCTTGGACACAAGATGCACAAGACGGTGTCATGTCATGTCGGTGTAAATTTGACTCATAGGGTAGGAGTAACATTCAGACTGATGCACATCTATGGCTGAAgaattgcaaaaacatttcaaaatgtactttatttctgtgaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016410 True 1092 mRNA 0.43 4 19155334 19161728

Neighbor

gene id symbol gene type direction distance location
AMCG00016409 NA coding downstream 11816 19109142 ~ 19143518 (-)
AMCG00016404 NA coding downstream 115830 19025838 ~ 19039504 (-)
AMCG00016403 NA coding downstream 140585 19006083 ~ 19014749 (-)
AMCG00016402 NA coding downstream 253753 18897556 ~ 18901581 (-)
AMCG00016401 NA coding downstream 719306 18420753 ~ 18436028 (-)
AMCG00016414 NA coding upstream 23210 19184938 ~ 19205594 (-)
AMCG00016419 NA coding upstream 115570 19277298 ~ 19279668 (-)
AMCG00016420 mre11a coding upstream 119974 19281702 ~ 19316677 (-)
AMCG00016418 cwc15,LOC100196400 coding upstream 204356 19366084 ~ 19375596 (-)
AMCG00016424 sesn3 coding upstream 216272 19378000 ~ 19406939 (-)
G13366 NA non-coding downstream 66702 19088224 ~ 19088632 (-)
G13341 NA non-coding downstream 77511 19077368 ~ 19077823 (-)
G13339 NA non-coding downstream 96661 19058405 ~ 19058673 (-)
G13334 NA non-coding downstream 253358 18826194 ~ 18901976 (-)
G13254 NA non-coding downstream 989564 18162787 ~ 18165770 (-)
G13392 NA non-coding upstream 3858 19165586 ~ 19253414 (-)
G13413 NA non-coding upstream 94910 19256638 ~ 19256919 (-)
G13414 NA non-coding upstream 96595 19258323 ~ 19258557 (-)
G13615 NA non-coding upstream 841421 20003149 ~ 20004940 (-)
G13680 NA non-coding upstream 1154014 20315742 ~ 20316579 (-)
G13367 NA other downstream 49953 19091239 ~ 19105381 (-)
AMCG00016376 NA other downstream 1613992 17538034 ~ 17541342 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other downstream 1888587 17263601 ~ 17266747 (-)
AMCG00016345 NA other downstream 2285332 16866318 ~ 16870002 (-)
G12945 ucp2,ucp2b,LOC106567822 other downstream 2294155 16858541 ~ 16861179 (-)
AMCG00016453 NA other upstream 967180 20128908 ~ 20135547 (-)
AMCG00016479 NA other upstream 1454781 20616509 ~ 20636960 (-)
AMCG00016480 NA other upstream 1504414 20666142 ~ 20683024 (-)
G13962 NA other upstream 4293364 23455092 ~ 23455811 (-)
G13969 NA other upstream 4537421 23699149 ~ 23700255 (-)

Expression


Co-expression Network