AMCG00016431 (anapc15)


Basic Information

Item Value
gene id AMCG00016431
gene name anapc15
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 19866278 ~ 19869018 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016431
TGCGTTTCCTGGGACCTTAATGAAGCGGAACCAGGATCACTGTGAGCTGCGCGGGCGGGGGACTCTTAGCGGGGACACCGGGTTCCGGCTGTTAATAGTTTGAATTTTGCAGCTGTGCATCGGGACAGTTGTTCTTGTTTGCAAGCTACAGTGAGGACATTAAACCTGTTGATAGTTTATTCCCCTTTGCTTTGGATCGGCCTGCCGGACCTCGTCTCCATAGGATGTCCACCCTGTTCCCTTCCCTGTTTCCGCGGATGACCGAGTCGCTGTGGTTTAATCTGGACCGGCCGTGTGTGGACGAGAATGAACTCCATCAACAGGAACAGCAGCATCAGACCTGGTTGCAGAGTATAGCTGAGAAAGACAACAATCTGATGCCCATTGGGAAGCCCGTTTCTGAGTTGACGTacgacgaggaggaggaggaagacgatGAGGACGAGGAGGACAGTGAGGAGGACTCTGAGGACGACGAGGACATGCAGGACATGGACGAGATGAACGACTACAACGAGTCTCCGGACGACGGGGAGATCAACGAGGTGGATATGGAAGGTGCTGACCAAGACCAGGACCAATGGATGATTTAAAGCAGTTGCTCATCTGCACCCCCTTTAATGGACAAGACTGGCTTGGTGCCTTCAGATGTGATGGATCACGCATTTAAATCTGGAAAACCTGAGGACAACGGATTGCTATTGTGGCCTTTCATCCTCAATTAAAAACTGCTAGTGGACACTGTTTTCCGCATTATTGCGTGGAAAGACACATTGTGCATTTGACTGCACCGTATCCTTTGTGTTATATTTATCGTAATTGAGTACACACAACTCTGTAGGTTTGGTGATGCTGTGTGCACGTTCAGTAGATTTAAAAGGAGGGGGAAGTACAGACCAGATACACAATAGTTTTAAATATGGAATCAGGAGATCAACCAGGTGCTGATTTGTTGATTTCTCCTGCTTTTGGGGGTCCATACCATACCTCCTCGTTGTTAACAGAATGGATAAAGGCTCGCCACAGGATATTGTGACCATCCAGCTCGGAGTACAGATGGTGCAGTTCTGTGTTTGTCATGCGTACTGGAGACTCGAGGACACTTCAGTGCTGCTACAGTGAAACTCATTGAGTAACTTTAAAGATGTTGGTTGTCATGCCAGACAGTCCATTTCCTGCAGTCTCCTGAATTCATATTCCTGTTCCAACAGAGGAGACTGGACTTGCACACAAAAGCTCAGGTGGCTGTGAATTCAGGTGGAAATCTGTATTCATACATCACTTCTTTAATGAGTTTTAAAGAATATCAagattaataattttatatatatatata

Function

symbol description
anapc15 Predicted to be involved in regulation of mitotic cell cycle spindle assembly checkpoint. Predicted to act upstream of or within cell division. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of anaphase-promoting complex. Orthologous to human ANAPC15 (anaphase promoting complex subunit 15).

NR:

description
PREDICTED: anaphase-promoting complex subunit 15 isoform X1

GO:

id name namespace
GO:0090266 regulation of mitotic cell cycle spindle assembly checkpoint biological_process
GO:0005680 anaphase-promoting complex cellular_component

KEGG:

id description
K25228 APC15, ANAPC15; anaphase-promoting complex subunit 15

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016431 True 1336 mRNA 0.47 5 19866278 19869018

Neighbor

gene id symbol gene type direction distance location
AMCG00016430 NA coding upstream 51668 19811402 ~ 19814610 (+)
AMCG00016432 clpb,LOC107568463,LOC108261447,LOC102793156 coding upstream 66464 19758327 ~ 19799814 (+)
AMCG00016422 NA coding upstream 421393 19438593 ~ 19444885 (+)
AMCG00016417 NA coding upstream 503808 19339826 ~ 19362470 (+)
AMCG00016421 NA coding upstream 540571 19324580 ~ 19325707 (+)
AMCG00016438 NA coding downstream 16740 19885758 ~ 19898268 (+)
AMCG00016439 pola1,LOC107666635,LOC107705179,LOC107721886,LOC107586771,LOC104949401 coding downstream 42822 19911840 ~ 19938673 (+)
AMCG00016441 hgd,LOC102787666 coding downstream 129414 19998432 ~ 20005939 (+)
AMCG00016451 NA coding downstream 138979 20007997 ~ 20009859 (+)
AMCG00016450 NA coding downstream 141278 20010296 ~ 20014909 (+)
G13500 NA non-coding upstream 301166 19564800 ~ 19565112 (+)
G13496 NA non-coding upstream 354112 19511913 ~ 19512166 (+)
G13495 NA non-coding upstream 395822 19470175 ~ 19470456 (+)
G13494 NA non-coding upstream 396180 19469635 ~ 19470098 (+)
G13493 NA non-coding upstream 397490 19468580 ~ 19468788 (+)
G13593 NA non-coding downstream 145926 20014944 ~ 20018086 (+)
G13599 NA non-coding downstream 162475 20031493 ~ 20032916 (+)
G13659 NA non-coding downstream 350425 20219443 ~ 20256020 (+)
G13662 spcs2,LOC107677086 non-coding downstream 418057 20287075 ~ 20289834 (+)
G13681 NA non-coding downstream 449999 20319017 ~ 20319339 (+)
AMCG00016407 NA other upstream 1392589 18419017 ~ 18473689 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other upstream 2266697 17562418 ~ 17599581 (+)
G13012 NA other upstream 2744346 17116793 ~ 17121932 (+)
AMCG00016329 NA other upstream 3380275 16484355 ~ 16486003 (+)
AMCG00016288 NA other upstream 5082743 14745316 ~ 14783535 (+)
AMCG00016429 lamtor1,LOC106581407 other downstream 6038 19875056 ~ 19879725 (+)
AMCG00016490 atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 other downstream 1913088 21782106 ~ 21832148 (+)
AMCG00016502 NA other downstream 3997249 23866267 ~ 23882946 (+)
AMCG00016506 NA other downstream 4069033 23938051 ~ 23945024 (+)
G14057 NA other downstream 4210999 24080017 ~ 24110182 (+)

Expression


Co-expression Network