AMCG00016447


Basic Information

Item Value
gene id AMCG00016447
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 20082654 ~ 20083255 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016447
tggtCGCCCATTTGTGAGCTAAAGAAGGCACAGCTATCAGGAAATCGCACCATGAATCCCTGCCCGGtgtatgacaaaaacaacaaaacactgttCCTCTTCTGCATCGGTGTTGATAAAACAGAGCGAgagcaaataaaaaatgcaaaaacgcAGCCAAACTGTGTTATCAAAGACAACAGTGAGAATTGGAGTGATATAACTAATTTGACAGAGAAGGTGATTGgccaaaaagaaaaggattggGCAACCTTCGCCGTGGGGCCGGGCCATGGGGTGCAGCTGAAGAGTGGGAGGTTGATTATCCCAGCCTATGCCTACAACATTGAGAGATGCTGCTCCACACCGTATTCCTTCTGCTTTTATAGTGATGAAGGACAGGTCTGGAAGATGGGAAAAAGTATGCCACAGTTATCTACACTAGAGTGTCAAATGGCAGAGGTTGAAATTCAGAGTGAAAAATCAGAGACAGAATCAGAGACAAAACTCAAAATTCTGAATTATTTGTACTGTAATGCCCGCAATGTAATGTCGGGTTACagggtagaagctgaaagtcaGAACGCAGGCAAAGATTTTGCAGAGAAGAAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016447 True 594 mRNA 0.43 2 20082654 20083255

Neighbor

gene id symbol gene type direction distance location
AMCG00016446 NA coding downstream 62 20071748 ~ 20082592 (-)
AMCG00016443 NA coding downstream 22489 20043350 ~ 20060165 (-)
AMCG00016442 NA coding downstream 42517 20031431 ~ 20040137 (-)
AMCG00016445 NA coding downstream 51634 20017380 ~ 20031020 (-)
AMCG00016444 NA coding downstream 74943 20005923 ~ 20007711 (-)
AMCG00016452 NA coding upstream 6314 20089569 ~ 20094925 (-)
AMCG00016454 NA coding upstream 62558 20145813 ~ 20146301 (-)
AMCG00016455 ddx10 coding upstream 172381 20255636 ~ 20282317 (-)
AMCG00016463 spcs2,LOC107677086 coding upstream 202067 20285322 ~ 20289785 (-)
AMCG00016462 kpna1,LOC102776202 coding upstream 209047 20292302 ~ 20303074 (-)
G13615 NA non-coding downstream 77714 20003149 ~ 20004940 (-)
G13414 NA non-coding downstream 824097 19258323 ~ 19258557 (-)
G13413 NA non-coding downstream 825735 19256638 ~ 19256919 (-)
G13392 NA non-coding downstream 829240 19165586 ~ 19253414 (-)
G13366 NA non-coding downstream 994022 19088224 ~ 19088632 (-)
G13680 NA non-coding upstream 232487 20315742 ~ 20316579 (-)
G13762 NA non-coding upstream 384991 20468246 ~ 20513404 (-)
G13766 NA non-coding upstream 403626 20486881 ~ 20492021 (-)
G13789 NA non-coding upstream 512074 20595329 ~ 20598765 (-)
G13806 NA non-coding upstream 563581 20646836 ~ 20652268 (-)
G13367 NA other downstream 977273 19091239 ~ 19105381 (-)
AMCG00016376 NA other downstream 2541312 17538034 ~ 17541342 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other downstream 2815907 17263601 ~ 17266747 (-)
AMCG00016345 NA other downstream 3212652 16866318 ~ 16870002 (-)
G12945 ucp2,ucp2b,LOC106567822 other downstream 3221475 16858541 ~ 16861179 (-)
AMCG00016453 NA other upstream 45653 20128908 ~ 20135547 (-)
AMCG00016479 NA other upstream 533254 20616509 ~ 20636960 (-)
AMCG00016480 NA other upstream 582887 20666142 ~ 20683024 (-)
G13962 NA other upstream 3371837 23455092 ~ 23455811 (-)
G13969 NA other upstream 3615894 23699149 ~ 23700255 (-)

Expression


Co-expression Network