AMCG00016452


Basic Information

Item Value
gene id AMCG00016452
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 20089569 ~ 20094925 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016452
GCGGGGGATTCCGCCCTGCCTGAATGTAGGCGCTGCTTTCTCAGTAACCCGGAAGTACTACAGAACTGCGACACCTGCCTTTATTTTGAGTCAAGATGGAGGGATCCTCGTATGAAGATGAAGTTGACGACTGGTTTATCGAATCCATTAACTTGTACACGGATCTGCATCTGTTTGAGCTCCAGGGTCCGACGCAAGTCATAGAATGGACCGGAGAGAAaaGTATCTGTGTAGCAGGCTATGGAAGTAGCAAAAGGAATGAAATCCTGGAGCTGGCTTTGCCTCAGAAACTGTACGCCAAAGAAAACCGGGGTTTGTGTCCTGAAAGGGATTTTAAGGTGGAACACGGGGGCTTCTCTGACACACCCATTCACTGCCTCAAGCACGTCTTGGGAACAAGATCTGTGGTGACCAGCGGTCCCCCCGAGAGCCCTCTGCAGATCTGGAGGATCGGAGATGTCATCAAGAGAACAGCATGTATTGAAGCTTCGACTGGGTCACGGAGCCAGAGGAAGGTTGCTCCCAGTCTCTCCGGGAAACCTTGTGTTCTCCACGCCTCCCAGGTCAATGACACAGCGCTCACTGACCTGGAGTCACACAGGTCTCTCTATTCAGTGGACACAGACTGTGCAGACAGAGTGAGCGGCCTAGAGTTTGTGAGTGCAGATGAGTTTGTGGTTTGCTCGGACAGGGGTCACTTGTGGTTGTGTGATGTGAGGGACCCAGCCGGCCTGCAGTCCGTGGCGAGCCCAGAGCAGGAGGGACTCCAGTGGTGTATGGGGTTGAAGAAACGGCACGTCCACACAGACCCAGCCGCCTGTGCTGTGGCGAGGCTCTCTTCTGCTTGCCAAGTCCTTGTCACAGATCTCAGAAGTCCAAGGAGCCCTTTGTGTCAGGCCAAGATGACCATCCACCAGGACGCTCCTTGTCTGGATTTCATGACTGTGACCTGGGCGCCAGCTTTAGATCAGTGTGTGGCTGTGTCAGGTTTCAATGGAGCAGTGCACATCTATGACACACAATCCTGGGGCCCAGCAGCCACGGAAGCAGAACCGCTGTTTATTCACAAGGGCCACAGGATGTCACACGACCCCGACAGGGACAGGGATTCAGTTGTGGTCACAACACATGTGTGGCATCCATGGAAACCCAGGACTGTGTTATCCGCTGCCACTAACGGCTCATTGCACGTCTGGGACTGGGCCGACCAGACAGCTGTCCACCGCTAAGAAGCACAGACATTTTAATACATGTCTTTTAGCTAACTCACAATCTGTATTTCCTGAGTCCTATGATTGAGGGAAATCTTCAGTCCTAACCcaggttttaatgtttaattcccCTTTTATTGGTTTCACTGTCAAGAACTGGTTACCAGAAGCTGACCCTGCAACATTCTGCGTGATTCAGCTTTCATAATAAACTGAACACGACCACATTTGTAACGTCCTTTTGATACACATGGATTCAGCATTATTCATATGTTTctgaaatgataaataaaaaatatttattctgtttttaggtttgttttttagaatgtattatttactattCTTCCATCTGGGAAATTTTGGACATCAACTATTTCCTATCAATGTATTTCCTGAGTCCTATGATTGAGGGGAAGCTTCGGTCCTAgtctaggttttattttttgcaatgttta

Function

GO: NA

KEGG:

id description
K24754 WDR73; WD repeat-containing protein 73

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016452 True 1669 mRNA 0.49 8 20089569 20094925

Neighbor

gene id symbol gene type direction distance location
AMCG00016447 NA coding downstream 6314 20082654 ~ 20083255 (-)
AMCG00016446 NA coding downstream 6977 20071748 ~ 20082592 (-)
AMCG00016443 NA coding downstream 29404 20043350 ~ 20060165 (-)
AMCG00016442 NA coding downstream 49432 20031431 ~ 20040137 (-)
AMCG00016445 NA coding downstream 58549 20017380 ~ 20031020 (-)
AMCG00016454 NA coding upstream 50888 20145813 ~ 20146301 (-)
AMCG00016455 ddx10 coding upstream 160711 20255636 ~ 20282317 (-)
AMCG00016463 spcs2,LOC107677086 coding upstream 190397 20285322 ~ 20289785 (-)
AMCG00016462 kpna1,LOC102776202 coding upstream 197377 20292302 ~ 20303074 (-)
AMCG00016459 NA coding upstream 239963 20334888 ~ 20339043 (-)
G13615 NA non-coding downstream 84629 20003149 ~ 20004940 (-)
G13414 NA non-coding downstream 831012 19258323 ~ 19258557 (-)
G13413 NA non-coding downstream 832650 19256638 ~ 19256919 (-)
G13392 NA non-coding downstream 836155 19165586 ~ 19253414 (-)
G13366 NA non-coding downstream 1000937 19088224 ~ 19088632 (-)
G13680 NA non-coding upstream 220817 20315742 ~ 20316579 (-)
G13762 NA non-coding upstream 373321 20468246 ~ 20513404 (-)
G13766 NA non-coding upstream 391956 20486881 ~ 20492021 (-)
G13789 NA non-coding upstream 500404 20595329 ~ 20598765 (-)
G13806 NA non-coding upstream 551911 20646836 ~ 20652268 (-)
G13367 NA other downstream 984188 19091239 ~ 19105381 (-)
AMCG00016376 NA other downstream 2548227 17538034 ~ 17541342 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other downstream 2822822 17263601 ~ 17266747 (-)
AMCG00016345 NA other downstream 3219567 16866318 ~ 16870002 (-)
G12945 ucp2,ucp2b,LOC106567822 other downstream 3228390 16858541 ~ 16861179 (-)
AMCG00016453 NA other upstream 33983 20128908 ~ 20135547 (-)
AMCG00016479 NA other upstream 521584 20616509 ~ 20636960 (-)
AMCG00016480 NA other upstream 571217 20666142 ~ 20683024 (-)
G13962 NA other upstream 3360167 23455092 ~ 23455811 (-)
G13969 NA other upstream 3604224 23699149 ~ 23700255 (-)

Expression


Co-expression Network