AMCG00016454


Basic Information

Item Value
gene id AMCG00016454
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 20145813 ~ 20146301 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016454
ATGGGTGCCAGGACAGCCCCGGATCTGGCGCTTTCCATCCCACATTGCACTTTCAACGGGACCATTGACCAGACCAATGGGACTTGCCTCCTCCAGGTGGATCACTTCTCTCAGGCTTTCTCGTCCACCGTTGTGCTCGTTGTGCTGGTCGCCGTCATTGTTGGGATCATCCTCGTTTCCCTCACCACGTTTCACTTCCACAAGAGCAagatgaaaaagagaaagatacAAAGGGCACAAGAGGAGTACGAGCGAGATAACTGCAGCCCCACAACAGCCAAGGGCAGACCTGCGGACAGACAGTGTATAATGGTCAGACCTGGGCACAGGGACGGGGACCATCGGCCACCCACTGGCGAGCAGAAATGTGAAAGAAAGCTGGGATCTCAGAGCGACCCCCCCATGGCTGTGGACGACTCAAATAAAGCGGATACCAGACACACAGGACAGGGACATGAGCAGTTATTGGAAACCGTAATCTTGTCTTGA

Function

GO:

id name namespace
GO:0015672 monovalent inorganic cation transport biological_process
GO:0030001 metal ion transport biological_process
GO:0006811 ion transport biological_process
GO:0006812 cation transport biological_process
GO:0006814 sodium ion transport biological_process

KEGG:

id description
ko04911 Insulin secretion

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016454 True 489 mRNA 0.54 1 20145813 20146301

Neighbor

gene id symbol gene type direction distance location
AMCG00016452 NA coding downstream 50888 20089569 ~ 20094925 (-)
AMCG00016447 NA coding downstream 62558 20082654 ~ 20083255 (-)
AMCG00016446 NA coding downstream 63221 20071748 ~ 20082592 (-)
AMCG00016443 NA coding downstream 85648 20043350 ~ 20060165 (-)
AMCG00016442 NA coding downstream 105676 20031431 ~ 20040137 (-)
AMCG00016455 ddx10 coding upstream 109335 20255636 ~ 20282317 (-)
AMCG00016463 spcs2,LOC107677086 coding upstream 139021 20285322 ~ 20289785 (-)
AMCG00016462 kpna1,LOC102776202 coding upstream 146001 20292302 ~ 20303074 (-)
AMCG00016459 NA coding upstream 188587 20334888 ~ 20339043 (-)
AMCG00016461 eif2s3,if2g,LOC106590489,LOC107727229,LOC107686712 coding upstream 195779 20342080 ~ 20355124 (-)
G13615 NA non-coding downstream 140873 20003149 ~ 20004940 (-)
G13414 NA non-coding downstream 887256 19258323 ~ 19258557 (-)
G13413 NA non-coding downstream 888894 19256638 ~ 19256919 (-)
G13392 NA non-coding downstream 892399 19165586 ~ 19253414 (-)
G13366 NA non-coding downstream 1057181 19088224 ~ 19088632 (-)
G13680 NA non-coding upstream 169441 20315742 ~ 20316579 (-)
G13762 NA non-coding upstream 321945 20468246 ~ 20513404 (-)
G13766 NA non-coding upstream 340580 20486881 ~ 20492021 (-)
G13789 NA non-coding upstream 449028 20595329 ~ 20598765 (-)
G13806 NA non-coding upstream 500535 20646836 ~ 20652268 (-)
AMCG00016453 NA other downstream 10266 20128908 ~ 20135547 (-)
G13367 NA other downstream 1040432 19091239 ~ 19105381 (-)
AMCG00016376 NA other downstream 2604471 17538034 ~ 17541342 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other downstream 2879066 17263601 ~ 17266747 (-)
AMCG00016345 NA other downstream 3275811 16866318 ~ 16870002 (-)
AMCG00016479 NA other upstream 470208 20616509 ~ 20636960 (-)
AMCG00016480 NA other upstream 519841 20666142 ~ 20683024 (-)
G13962 NA other upstream 3308791 23455092 ~ 23455811 (-)
G13969 NA other upstream 3552848 23699149 ~ 23700255 (-)
AMCG00016504 NA other upstream 3694761 23841062 ~ 23862739 (-)

Expression


Co-expression Network