AMCG00016469


Basic Information

Item Value
gene id AMCG00016469
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 20380613 ~ 20392489 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016469
GTTGTCCTCTTCGGGACACCGTACCTAACAGCTCAAGGCACCTCCAAGAAGGACTATGCACAAGGTGGTGTGGCTGGTGGCCGTGCCTGGGGGTCTGGGCCTGGCAGCAGGGAGAGTGGTGTATGCTGCCAGCGAGGAGAAGCAGGACAGCGTCCCCCTGAGGACTGAAGAGctgtCTCTGTACACGACCCCACAAGACAAGTACAAGTACTTAGAGCCTGAGGCTAGTCAGCTGGAGCAGGGCATCTCAGTGCTGAGGAAATCTGCAGAGCCCTACACCACCTGGTGTCAGGTACAGTATGGGGGACTAAGCAAACTGGCCAAACAACAGTGGAGAAAGCACAGGTATTATAAACCAATGCATAACGAAGCTTACATGGCAGCTAAGCCAAGATTTGAAGGCTCTGTCCAGTTTGGAAAAGAAGGCTACGAGTTCCTGAGAGATCCCCCCCCCGGGTTTTACCCACGCGTCGGAGTCATTGGCTTTGCCGGAATTCTAGGACTCTTTCTGGCAAGAGGTTCCAAGATCAAGAAGCTGGTCTATCCGACTGGCTTAATGGCACTTGGGGCTTCCCTATATTATCCTCAACAAGCTGTTACAGTCACAAAGGTGACAGGTGACACTCTGTACGACTGGAGTCTGTGGGGCTACTtggctgtggagtctctctgGAAGGACAAGAGCGCTGGGAAGCAGCCCAGTGTGAAGGCCCAGTGAGGACTGACAGGGCAGCAGTGCAGGCACTTGGGACTGCTGGGGCACCAGGTACACTgagtccccccccaccacacacacctgGCATcgctgcgctctctctctcaggatctCCGTCTTGCACTAGCCCATCCCAGAGTATGCAGATGGTTCTCACTTACCATTTTTAACTTGGAATGCTACTGATTGGATTCTGccttcccccccacctcttCTTGTAActactgtatttatgtaaagtATTAAACAGCTCTCTGCCAAGGTAATTATTTTCCTGGATGCATTGTTCCTGGGAAGTTTTACATTCTGACGTCTAGGTCACTCCACGTGAACTTAACTCTCTCTGCTCCTAAAATAGTCCAGCTGTGGCCTAGAGtggccttggataaaggcatcaggTAAATGTCTTATAAGTTGTCCTTCACAATCACTGTCAAGGTGTTGGATTCTGGGCAGGGGGTTGTGCCCACCAGCCTACTGTCTGTCATAGTTGCTAGAGTAACCCCTGTATTCAGACCTAGAGGCATCTTAGCCATAAGGGCATTTCTATCAGATATCTGTAGTAAAATGTAGTGATATAGAACTGTCTTCTGAACATGGCTACATAAAGGATAAAATGCCCTCTCTTGAATGCACACTCTTGAAGTTGAGGGCACGATTTCTAAATATAACTGAATGGTGTTTTCAAAAGGATGTGGTGCAGCTCGTTTGAACAGAAggaatattgtattatgttctCAGCTCTGCTTATCGTTCCTTTTTCCTGCCTTTCACCAAAGCGAGTGATTTTTAAGAAGATCAGGAACAGCATGACGCACAGGCAGCAGCTGCACTGTAGGCGCAAGAGTCTGAGTGAGTGTAGGACAGGGAGAGGGGATTATTGCTGGACAGGTCTTCTGCCAGTTCACCAGATGGTCAGTAAGCACTTTATTCCATCTGCACACCATCCGCCTAGAAAACAGGGTGATTCCTCTGACTTTTATAGCACCaaatatacacactcacattaATGCCACCGATCTGAAATCAAACAACATATCTTGCACCAAGTGTCACATTATCATCCTTTGTGCTTTTACTTATCAGAGCACACTGACAAAGCAAGTGGTTTTGAAACTGGTACAGTAGGTTGACCAGTTCTCCAGAAGCTCCTTTGGGGGAAGACTGGATAAACCTTATGCCTGTTATATACCCGCCCCCTTAAATTACAAATTGAGTTGCATCTGCCTGTTATTGCAGAATCAACCATCTTTAAACGGCAACTTTCTTAACTGTAGAGCACATAATTCAATTGGAAAATAATCGGGATTGTCAGCAGGTTATTGAGCAAACTGAACGATAAATTGTGGCCAGATCTCacttgtaaatgttttctttgcatccaaaacaaaccagaacaaatacattcttTAACATGCAGTATCACAAGAGGATTTTACTCTTGTAATATGCCATAGTAACCAGATTAGATGCACTTTTAGGGCTGCGCCTGTGAAAGATTTTTATCGATATACCGTTGGAACAATTCACCGCGGTGATACTGTGGGG

Function

GO: NA

KEGG:

id description
K24625 APOO; MICOS complex subunit MIC26

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016469 True 2263 mRNA 0.47 9 20380613 20392489

Neighbor

gene id symbol gene type direction distance location
AMCG00016456 klhl15,LOC107727232 coding upstream 27107 20350648 ~ 20353506 (+)
AMCG00016458 NA coding upstream 48838 20328705 ~ 20331775 (+)
AMCG00016457 NA coding upstream 63859 20308979 ~ 20316754 (+)
AMCG00016448 abcg1,LOC108426925,LOC107684024,LOC107561305,LOC107677096,LOC107755138,LOC106612441 coding upstream 254329 20104916 ~ 20126284 (+)
AMCG00016449 NA coding upstream 315991 20059343 ~ 20064622 (+)
AMCG00016467 NA coding downstream 15814 20408303 ~ 20419818 (+)
AMCG00016466 pdha1a,LOC107599948,LOC107726384,LOC107672749,LOC107592287 coding downstream 34004 20426493 ~ 20434211 (+)
AMCG00016465 NA coding downstream 43278 20435767 ~ 20440084 (+)
AMCG00016468 NA coding downstream 55861 20448350 ~ 20466290 (+)
AMCG00016475 casr coding downstream 85566 20478055 ~ 20482996 (+)
G13682 eif2s3,LOC107727229,LOC107686712,LOC107741782 non-coding upstream 35541 20342074 ~ 20345072 (+)
G13681 NA non-coding upstream 61274 20319017 ~ 20319339 (+)
G13662 spcs2,LOC107677086 non-coding upstream 90779 20287075 ~ 20289834 (+)
G13659 NA non-coding upstream 124593 20219443 ~ 20256020 (+)
G13599 NA non-coding upstream 347697 20031493 ~ 20032916 (+)
G13685 NA non-coding downstream 1022 20393511 ~ 20403506 (+)
G13700 prdx4,LOC107734341,LOC107665442,LOC107654298,LOC105904605 non-coding downstream 31648 20424137 ~ 20425842 (+)
G13791 NA non-coding downstream 222256 20614745 ~ 20617697 (+)
G13798 NA non-coding downstream 254346 20646835 ~ 20652272 (+)
G13799 NA non-coding downstream 261181 20653670 ~ 20655615 (+)
AMCG00016429 lamtor1,LOC106581407 other upstream 500888 19875056 ~ 19879725 (+)
AMCG00016407 NA other upstream 1906924 18419017 ~ 18473689 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other upstream 2781032 17562418 ~ 17599581 (+)
G13012 NA other upstream 3258681 17116793 ~ 17121932 (+)
AMCG00016329 NA other upstream 3894610 16484355 ~ 16486003 (+)
AMCG00016490 atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 other downstream 1389617 21782106 ~ 21832148 (+)
AMCG00016502 NA other downstream 3473778 23866267 ~ 23882946 (+)
AMCG00016506 NA other downstream 3545562 23938051 ~ 23945024 (+)
G14057 NA other downstream 3687528 24080017 ~ 24110182 (+)
AMCG00016537 NA other downstream 4087217 24479706 ~ 24561807 (+)

Expression


Co-expression Network