Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016482 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 20872393 ~ 20876476 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0040008 | regulation of growth | biological_process |
| id | description |
|---|---|
| K20041 | GAP43; neuromodulin |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016482 | True | 792 | mRNA | 0.52 | 2 | 20872393 | 20876476 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016478 | NA | coding | upstream | 277468 | 20581946 ~ 20594925 (+) |
| AMCG00016474 | NA | coding | upstream | 370204 | 20499298 ~ 20502189 (+) |
| AMCG00016475 | casr | coding | upstream | 389397 | 20478055 ~ 20482996 (+) |
| AMCG00016468 | NA | coding | upstream | 406103 | 20448350 ~ 20466290 (+) |
| AMCG00016465 | NA | coding | upstream | 432309 | 20435767 ~ 20440084 (+) |
| AMCG00016489 | arrb1,LOC108440366,LOC108277835 | coding | downstream | 985312 | 21861788 ~ 21904114 (+) |
| AMCG00016493 | NA | coding | downstream | 1028906 | 21905382 ~ 21906361 (+) |
| AMCG00016495 | NA | coding | downstream | 1057678 | 21934154 ~ 21935071 (+) |
| AMCG00016492 | NA | coding | downstream | 1113930 | 21990406 ~ 21991423 (+) |
| AMCG00016491 | NA | coding | downstream | 1168889 | 22045365 ~ 22056229 (+) |
| G13799 | NA | non-coding | upstream | 216778 | 20653670 ~ 20655615 (+) |
| G13798 | NA | non-coding | upstream | 220121 | 20646835 ~ 20652272 (+) |
| G13791 | NA | non-coding | upstream | 254696 | 20614745 ~ 20617697 (+) |
| G13700 | prdx4,LOC107734341,LOC107665442,LOC107654298,LOC105904605 | non-coding | upstream | 446551 | 20424137 ~ 20425842 (+) |
| G13685 | NA | non-coding | upstream | 468887 | 20393511 ~ 20403506 (+) |
| G13873 | NA | non-coding | downstream | 1045677 | 21922153 ~ 21922461 (+) |
| G13892 | NA | non-coding | downstream | 1359695 | 22236171 ~ 22236399 (+) |
| G13894 | NA | non-coding | downstream | 1453587 | 22330063 ~ 22330299 (+) |
| G13902 | NA | non-coding | downstream | 1601860 | 22478336 ~ 22478597 (+) |
| G13928 | NA | non-coding | downstream | 2038320 | 22914796 ~ 22915056 (+) |
| AMCG00016429 | lamtor1,LOC106581407 | other | upstream | 992668 | 19875056 ~ 19879725 (+) |
| AMCG00016407 | NA | other | upstream | 2398704 | 18419017 ~ 18473689 (+) |
| AMCG00016379 | cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 | other | upstream | 3272812 | 17562418 ~ 17599581 (+) |
| G13012 | NA | other | upstream | 3750461 | 17116793 ~ 17121932 (+) |
| AMCG00016329 | NA | other | upstream | 4386390 | 16484355 ~ 16486003 (+) |
| AMCG00016490 | atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 | other | downstream | 905630 | 21782106 ~ 21832148 (+) |
| AMCG00016502 | NA | other | downstream | 2989791 | 23866267 ~ 23882946 (+) |
| AMCG00016506 | NA | other | downstream | 3061575 | 23938051 ~ 23945024 (+) |
| G14057 | NA | other | downstream | 3203541 | 24080017 ~ 24110182 (+) |
| AMCG00016537 | NA | other | downstream | 3603230 | 24479706 ~ 24561807 (+) |
