Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016491 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 22045365 ~ 22056229 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0050896 | response to stimulus | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0004871 | obsolete signal transducer activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016491 | True | 1308 | mRNA | 0.37 | 2 | 22045365 | 22056229 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016492 | NA | coding | upstream | 53942 | 21990406 ~ 21991423 (+) |
| AMCG00016495 | NA | coding | upstream | 110294 | 21934154 ~ 21935071 (+) |
| AMCG00016493 | NA | coding | upstream | 139004 | 21905382 ~ 21906361 (+) |
| AMCG00016489 | arrb1,LOC108440366,LOC108277835 | coding | upstream | 141251 | 21861788 ~ 21904114 (+) |
| AMCG00016482 | NA | coding | upstream | 1168889 | 20872393 ~ 20876476 (+) |
| AMCG00016494 | NA | coding | downstream | 90444 | 22146673 ~ 22157270 (+) |
| AMCG00016496 | NA | coding | downstream | 270570 | 22326799 ~ 22327023 (+) |
| AMCG00016498 | NA | coding | downstream | 600431 | 22656660 ~ 22667322 (+) |
| AMCG00016499 | NA | coding | downstream | 922665 | 22978894 ~ 22984657 (+) |
| AMCG00016501 | NA | coding | downstream | 1597165 | 23653394 ~ 23716846 (+) |
| G13873 | NA | non-coding | upstream | 122904 | 21922153 ~ 21922461 (+) |
| G13799 | NA | non-coding | upstream | 1389750 | 20653670 ~ 20655615 (+) |
| G13798 | NA | non-coding | upstream | 1393093 | 20646835 ~ 20652272 (+) |
| G13791 | NA | non-coding | upstream | 1427668 | 20614745 ~ 20617697 (+) |
| G13700 | prdx4,LOC107734341,LOC107665442,LOC107654298,LOC105904605 | non-coding | upstream | 1619523 | 20424137 ~ 20425842 (+) |
| G13892 | NA | non-coding | downstream | 179942 | 22236171 ~ 22236399 (+) |
| G13894 | NA | non-coding | downstream | 273834 | 22330063 ~ 22330299 (+) |
| G13902 | NA | non-coding | downstream | 422107 | 22478336 ~ 22478597 (+) |
| G13928 | NA | non-coding | downstream | 858567 | 22914796 ~ 22915056 (+) |
| G13938 | NA | non-coding | downstream | 953888 | 23010117 ~ 23010500 (+) |
| AMCG00016490 | atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 | other | upstream | 213217 | 21782106 ~ 21832148 (+) |
| AMCG00016429 | lamtor1,LOC106581407 | other | upstream | 2165640 | 19875056 ~ 19879725 (+) |
| AMCG00016407 | NA | other | upstream | 3571676 | 18419017 ~ 18473689 (+) |
| AMCG00016379 | cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 | other | upstream | 4445784 | 17562418 ~ 17599581 (+) |
| G13012 | NA | other | upstream | 4923433 | 17116793 ~ 17121932 (+) |
| AMCG00016502 | NA | other | downstream | 1810038 | 23866267 ~ 23882946 (+) |
| AMCG00016506 | NA | other | downstream | 1881822 | 23938051 ~ 23945024 (+) |
| G14057 | NA | other | downstream | 2023788 | 24080017 ~ 24110182 (+) |
| AMCG00016537 | NA | other | downstream | 2423477 | 24479706 ~ 24561807 (+) |
| G14326 | NA | other | downstream | 2951733 | 25007962 ~ 25010687 (+) |
