AMCG00016493



Basic Information


Item Value
gene id AMCG00016493
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 21905382 ~ 21906361 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00016493
gaacTCAGCAGAGAGTGATGTCAGCACTAAATACTTCAGCGTTGCATCCAGTAGGGTTTATTTTGATGGGGTTTCCTGGCATAGAGCACCTGCAGCACTGGCTTTCTATCCCTTTCACTGTCTTGTACATCATGGCCTTAGTAGGTAACAGTACAATAATTTTGGTAGTTATATTTGAACAACGTCTTCATACCCCTAtATTGCCTTATTGCTCATCTGTTTCTATCCCCCATTGTTACTGCGATCATATGGCTGTTGCTAAACTGGCATGCACAAATATAATCATGAACAGTAATTATGGACTCTCTGTGGCTCTAATTCTAGCAGGTCTGGATTTAGTATGTATTGGATTTTCTTATATAATGATATTTAGAGCAGTCCTAAAGCTTGGATCAAAGGGAGCTCACCTTAAAGCACTAAACACTTGTGGTTCTCACTTGTTTGTTATCATGTATTTCTACATAACTTccctgtttaattatttagtctACAGGTTTGGGAAGGATGTACCTGTCCATGTTCATAGCATTTTTGCAGTCTTGTATCTTCTCATTCCTCCAGTGTTAAACCCTATGGTTTATGCTGTAAGGACCAAGGAAATCCGTCACGCATTTCTGAAGCTTTTCCTGCCGAGCAAGATTGACTCAGATTTGAGCCATCGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00016493 True 662 mRNA 0.40 2 21905382 21906361

Neighbor


gene id symbol gene type direction distance location
AMCG00016489 arrb1,LOC108440366,LOC108277835 coding upstream 1268 21861788 ~ 21904114 (+)
AMCG00016482 NA coding upstream 1028906 20872393 ~ 20876476 (+)
AMCG00016478 NA coding upstream 1310457 20581946 ~ 20594925 (+)
AMCG00016474 NA coding upstream 1403193 20499298 ~ 20502189 (+)
AMCG00016475 casr coding upstream 1422386 20478055 ~ 20482996 (+)
AMCG00016495 NA coding downstream 27793 21934154 ~ 21935071 (+)
AMCG00016492 NA coding downstream 84045 21990406 ~ 21991423 (+)
AMCG00016491 NA coding downstream 139004 22045365 ~ 22056229 (+)
AMCG00016494 NA coding downstream 240312 22146673 ~ 22157270 (+)
AMCG00016496 NA coding downstream 420438 22326799 ~ 22327023 (+)
G13799 NA non-coding upstream 1249767 20653670 ~ 20655615 (+)
G13798 NA non-coding upstream 1253110 20646835 ~ 20652272 (+)
G13791 NA non-coding upstream 1287685 20614745 ~ 20617697 (+)
G13700 prdx4,LOC107734341,LOC107665442,LOC107654298,LOC105904605 non-coding upstream 1479540 20424137 ~ 20425842 (+)
G13685 NA non-coding upstream 1501876 20393511 ~ 20403506 (+)
G13873 NA non-coding downstream 15792 21922153 ~ 21922461 (+)
G13892 NA non-coding downstream 329810 22236171 ~ 22236399 (+)
G13894 NA non-coding downstream 423702 22330063 ~ 22330299 (+)
G13902 NA non-coding downstream 571975 22478336 ~ 22478597 (+)
G13928 NA non-coding downstream 1008435 22914796 ~ 22915056 (+)
AMCG00016490 atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 other upstream 73234 21782106 ~ 21832148 (+)
AMCG00016429 lamtor1,LOC106581407 other upstream 2025657 19875056 ~ 19879725 (+)
AMCG00016407 NA other upstream 3431693 18419017 ~ 18473689 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other upstream 4305801 17562418 ~ 17599581 (+)
G13012 NA other upstream 4783450 17116793 ~ 17121932 (+)
AMCG00016502 NA other downstream 1959906 23866267 ~ 23882946 (+)
AMCG00016506 NA other downstream 2031690 23938051 ~ 23945024 (+)
G14057 NA other downstream 2173656 24080017 ~ 24110182 (+)
AMCG00016537 NA other downstream 2573345 24479706 ~ 24561807 (+)
G14326 NA other downstream 3101601 25007962 ~ 25010687 (+)

Expression



Co-expression Network