AMCG00016495


Basic Information

Item Value
gene id AMCG00016495
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 21934154 ~ 21935071 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016495
ATGGGGTTTCCTGGCATAGAGCACCTGCAGCACTGGCTTTCTATCCCTTTCACTGTCTTGTACATCACGGCCTTAGTAGTTTTAACTGGGCTGATTCCCACCTTGGCCTCAAGATTGCCTTACTGCTCATCTGTTTGTATATCTCATTGTTACTGCGATCATATGGCTGTGGCTAAACTGGCATGCACAAATATAATCATGAACAATTATTATGGACTCTTTGTGGCACTTTCCATATTAGGTGTGGATGCAATATTTGTTGGATTTTCTTATATAATGATATTTAGAGCAGTCCTAAAGCTTGGATCAAAGGGAGCTCGCCTTAAAGCACTAAACACTTGTGGTTCTCACTTGTTCGTTATCATGTATTTCTACATAATTTccctgtttaattatttagtctACAGGTTTGGGAAGGATGTACCAGTCCATGTTCACGTTGTTTTTGGAGTCTTGTATCTTCTCATTCCTCCAGTGTTAAACCCTATGGTTTATGCTGTAAGGACCAAGGAAATCCGTCACGCATTTCTGAGGCATTTCCTGCCAAGAAAGATTGACTCAGATTTGAGTCATCGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016495 True 579 mRNA 0.41 2 21934154 21935071

Neighbor

gene id symbol gene type direction distance location
AMCG00016493 NA coding upstream 27793 21905382 ~ 21906361 (+)
AMCG00016489 arrb1,LOC108440366,LOC108277835 coding upstream 30040 21861788 ~ 21904114 (+)
AMCG00016482 NA coding upstream 1057678 20872393 ~ 20876476 (+)
AMCG00016478 NA coding upstream 1339229 20581946 ~ 20594925 (+)
AMCG00016474 NA coding upstream 1431965 20499298 ~ 20502189 (+)
AMCG00016492 NA coding downstream 55335 21990406 ~ 21991423 (+)
AMCG00016491 NA coding downstream 110294 22045365 ~ 22056229 (+)
AMCG00016494 NA coding downstream 211602 22146673 ~ 22157270 (+)
AMCG00016496 NA coding downstream 391728 22326799 ~ 22327023 (+)
AMCG00016498 NA coding downstream 721589 22656660 ~ 22667322 (+)
G13873 NA non-coding upstream 11693 21922153 ~ 21922461 (+)
G13799 NA non-coding upstream 1278539 20653670 ~ 20655615 (+)
G13798 NA non-coding upstream 1281882 20646835 ~ 20652272 (+)
G13791 NA non-coding upstream 1316457 20614745 ~ 20617697 (+)
G13700 prdx4,LOC107734341,LOC107665442,LOC107654298,LOC105904605 non-coding upstream 1508312 20424137 ~ 20425842 (+)
G13892 NA non-coding downstream 301100 22236171 ~ 22236399 (+)
G13894 NA non-coding downstream 394992 22330063 ~ 22330299 (+)
G13902 NA non-coding downstream 543265 22478336 ~ 22478597 (+)
G13928 NA non-coding downstream 979725 22914796 ~ 22915056 (+)
G13938 NA non-coding downstream 1075046 23010117 ~ 23010500 (+)
AMCG00016490 atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 other upstream 102006 21782106 ~ 21832148 (+)
AMCG00016429 lamtor1,LOC106581407 other upstream 2054429 19875056 ~ 19879725 (+)
AMCG00016407 NA other upstream 3460465 18419017 ~ 18473689 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other upstream 4334573 17562418 ~ 17599581 (+)
G13012 NA other upstream 4812222 17116793 ~ 17121932 (+)
AMCG00016502 NA other downstream 1931196 23866267 ~ 23882946 (+)
AMCG00016506 NA other downstream 2002980 23938051 ~ 23945024 (+)
G14057 NA other downstream 2144946 24080017 ~ 24110182 (+)
AMCG00016537 NA other downstream 2544635 24479706 ~ 24561807 (+)
G14326 NA other downstream 3072891 25007962 ~ 25010687 (+)

Expression


Co-expression Network