AMCG00016500


Basic Information

Item Value
gene id AMCG00016500
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 23728848 ~ 23751132 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016500
ACTACCTCTATTTGGATCTCACATGTCAGTAGTGAAGCTTTCATGTACAGCCACCACACTAAACAATGCTTATGGATTAATTCTTATAATTGCCCAGTTTGCACATGCCTTCTTCATTGTATATACTTACATACAGATCATTAGAGCATGTTTAAAGTCTATCGAACAGAGGAGTAAATTCATGCAGACCTGCCTGGCCCATCTGATGGCTCTGATCAATTTTGccatttctgcttttattgATATGATGTACAGCCAGTACAGCTCAGAGACTCTTTCTCAAAGCCTGCGCAACTTCATGTCTGTGGAATACCTAGTCATCCCCCCCTCTTCAACCACCTCCCAGTATGGCTCAATGACTCTTTCTCAGAGCCTGCGCAACTTCATGGCTGTGGAATACCTGGTCATCCCCCCCCTCTTCAACCCCCTCGTATACGGACTGAAACTGCATCAGATTCGAAGGAGAGTCTTCAGAGCGTGTGCCAGAGACAAGAGCCTGCGCAACATCATGGCTGTGGAATACCTGGTCATCCCCCCCCTCTTCAACCCTCTTGTATACGGACTGAAACTGCATCAGATTCGAAGGAGAGTCTTCAGAGCGTGTGCCAGAGACAAGGTCACTCAGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016500 True 628 mRNA 0.47 3 23728848 23751132

Neighbor

gene id symbol gene type direction distance location
AMCG00016501 NA coding upstream 12002 23653394 ~ 23716846 (+)
AMCG00016499 NA coding upstream 744191 22978894 ~ 22984657 (+)
AMCG00016498 NA coding upstream 1061526 22656660 ~ 22667322 (+)
AMCG00016496 NA coding upstream 1401825 22326799 ~ 22327023 (+)
AMCG00016494 NA coding upstream 1571578 22146673 ~ 22157270 (+)
AMCG00016503 NA coding downstream 17004 23768136 ~ 23815510 (+)
AMCG00016509 NA coding downstream 152872 23904004 ~ 23913433 (+)
AMCG00016507 ccdc58,LOC107733097 coding downstream 174659 23925791 ~ 23934450 (+)
AMCG00016508 NA coding downstream 208172 23959304 ~ 23972841 (+)
AMCG00016516 NA coding downstream 271282 24022414 ~ 24029956 (+)
G13953 NA non-coding upstream 381136 23347427 ~ 23347712 (+)
G13949 NA non-coding upstream 403088 23325560 ~ 23325760 (+)
G13943 NA non-coding upstream 616683 23111926 ~ 23112165 (+)
G13939 NA non-coding upstream 717979 23010646 ~ 23010869 (+)
G13938 NA non-coding upstream 718348 23010117 ~ 23010500 (+)
G13979 lipt2 non-coding downstream 111083 23862215 ~ 23865800 (+)
G14132 NA non-coding downstream 566668 24317800 ~ 24321319 (+)
G14136 NA non-coding downstream 585838 24336970 ~ 24338848 (+)
G14127 eif1ax,EIF1AX,eif1axb,LOC105905255,LOC106563585,LOC106590461,LOC108411992 non-coding downstream 619194 24370326 ~ 24375827 (+)
G14177 NA non-coding downstream 668226 24419358 ~ 24419607 (+)
AMCG00016490 atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 other upstream 1896700 21782106 ~ 21832148 (+)
AMCG00016429 lamtor1,LOC106581407 other upstream 3849123 19875056 ~ 19879725 (+)
AMCG00016407 NA other upstream 5255159 18419017 ~ 18473689 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other upstream 6129267 17562418 ~ 17599581 (+)
G13012 NA other upstream 6606916 17116793 ~ 17121932 (+)
AMCG00016502 NA other downstream 115135 23866267 ~ 23882946 (+)
AMCG00016506 NA other downstream 186919 23938051 ~ 23945024 (+)
G14057 NA other downstream 328885 24080017 ~ 24110182 (+)
AMCG00016537 NA other downstream 728574 24479706 ~ 24561807 (+)
G14326 NA other downstream 1256830 25007962 ~ 25010687 (+)

Expression


Co-expression Network