AMCG00016501


Basic Information

Item Value
gene id AMCG00016501
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 23653394 ~ 23716846 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016501
ATGGCCGCAGCCAAACCCTGTCGTGTGAGATCCACCCAGGGGGGTTCCAGTAATGAACCTCCCCGTCTCAGCCTGGTCAATGTAGGAGGCCGTGACGTTGATGCCCTGCTGGATTCAGGCAGCATGGTCACCTTGTATTGGAAACAGCGCCAACCTGCCCACAGGAGGCAGGGTGCAGGCTACTCGTGGAGCCTGAGAAACCCCTTGAGGCAAGCAATCAAGAAGAGGAGGATTTCAGGCGACACGCTGATCAGCACACCCCTCAGAGAGCTGGAGCCAGGCAACCCAGCGAGTTTCAACGCCTCCCAGTGGAAAGTCAGACAGACCCTGGATGTGCTGGGACCCTGGATGGCACCTTCCGCCTCTGGAGGGGAGGTCCAGAAGAATTGCTCGGGAGCCTCAGCAAAGATGGCCTTCTTCCGGGCACTGTCGCATGAAGAGCTTCAGCGCTACGTGAGACTGGCGGTGCCCACCACGCTTGATCAGGCCCTGAAGTTGGGGGCCCATGTAGAAGGAGTCCATAGTGGAGTACTGCCCACAACCAAACGAGCCCTATACTTCTGTTGCCTCAGTGTCACGACTGCCACGGCCTCAGTCCAAATCACCGGAAAACTCTGGTGGGAAGGCCTAGAAGGGGGACAGCCTTCCCACCACAAAACTCCCCCAGATCCAACAGCCATGCTGGTTGAAGCCATTGATCTGGGCCAGATCCGTCAAGGCCGCAGCCTGTACCTCCCCTGCTCCATTGAAGGGCAAGTCTGTCGGGGCCTGGTTGATACTGGCTCCACCATCTCCCTGCCATGCTACGGGACCATTGCCATTCCAGAGACAGCATGGAAAAGGTCAGCTGTGGAGGCCAAGAGTAAGGAGATGGCCGCTGCGGAGGTGATCGAGCCATCTGACAGCCTGTGGTCAGCCCCAGCGGTGCTGGATGGCACCTGGAGGTTTTCCATGGATTACAAGCTCTCCGCTCTCATGATCTCCGCAAGCCTGCGGAACATCATGGCTGTGGAATTCCTGGTCATCCCTCCTCTCTTCAACCCCCTCATATATGGACTGAAACTGCATCAGATTCGAAGGAGAGTTTTCAGAGTGTGTGCCAAAGACAAGGTCATTCATATGTATGGCACAGAGACTCTTTCTCAGAGCCTGCGCATCTTCATGGCTGTGGAATATCTGGTCATCCCCCCCCTATTCAACCCCCTCGTATACGGACTGAAACTGCATCAGATTCGAAGCAGAGTCTTCAGAGCGTGTGCCAGAGACAAGGTCACTCAGATGGTCCCCTCCGACCTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016501 True 1299 mRNA 0.57 7 23653394 23716846

Neighbor

gene id symbol gene type direction distance location
AMCG00016499 NA coding upstream 668737 22978894 ~ 22984657 (+)
AMCG00016498 NA coding upstream 986072 22656660 ~ 22667322 (+)
AMCG00016496 NA coding upstream 1326371 22326799 ~ 22327023 (+)
AMCG00016494 NA coding upstream 1496124 22146673 ~ 22157270 (+)
AMCG00016491 NA coding upstream 1597165 22045365 ~ 22056229 (+)
AMCG00016500 NA coding downstream 12002 23728848 ~ 23751132 (+)
AMCG00016503 NA coding downstream 51290 23768136 ~ 23815510 (+)
AMCG00016509 NA coding downstream 187158 23904004 ~ 23913433 (+)
AMCG00016507 ccdc58,LOC107733097 coding downstream 208945 23925791 ~ 23934450 (+)
AMCG00016508 NA coding downstream 242458 23959304 ~ 23972841 (+)
G13953 NA non-coding upstream 305682 23347427 ~ 23347712 (+)
G13949 NA non-coding upstream 327634 23325560 ~ 23325760 (+)
G13943 NA non-coding upstream 541229 23111926 ~ 23112165 (+)
G13939 NA non-coding upstream 642525 23010646 ~ 23010869 (+)
G13938 NA non-coding upstream 642894 23010117 ~ 23010500 (+)
G13979 lipt2 non-coding downstream 145369 23862215 ~ 23865800 (+)
G14132 NA non-coding downstream 600954 24317800 ~ 24321319 (+)
G14136 NA non-coding downstream 620124 24336970 ~ 24338848 (+)
G14127 eif1ax,EIF1AX,eif1axb,LOC105905255,LOC106563585,LOC106590461,LOC108411992 non-coding downstream 653480 24370326 ~ 24375827 (+)
G14177 NA non-coding downstream 702512 24419358 ~ 24419607 (+)
AMCG00016490 atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 other upstream 1821246 21782106 ~ 21832148 (+)
AMCG00016429 lamtor1,LOC106581407 other upstream 3773669 19875056 ~ 19879725 (+)
AMCG00016407 NA other upstream 5179705 18419017 ~ 18473689 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other upstream 6053813 17562418 ~ 17599581 (+)
G13012 NA other upstream 6531462 17116793 ~ 17121932 (+)
AMCG00016502 NA other downstream 149421 23866267 ~ 23882946 (+)
AMCG00016506 NA other downstream 221205 23938051 ~ 23945024 (+)
G14057 NA other downstream 363171 24080017 ~ 24110182 (+)
AMCG00016537 NA other downstream 762860 24479706 ~ 24561807 (+)
G14326 NA other downstream 1291116 25007962 ~ 25010687 (+)

Expression


Co-expression Network