Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016515 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 24073722 ~ 24077286 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:1990351 | transporter complex | cellular_component |
| GO:0034702 | ion channel complex | cellular_component |
| GO:0034703 | cation channel complex | cellular_component |
| GO:0034704 | calcium channel complex | cellular_component |
| GO:0005891 | voltage-gated calcium channel complex | cellular_component |
| GO:1902495 | transmembrane transporter complex | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016515 | True | 684 | mRNA | 0.61 | 3 | 24073722 | 24077286 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016516 | NA | coding | upstream | 43766 | 24022414 ~ 24029956 (+) |
| AMCG00016508 | NA | coding | upstream | 100881 | 23959304 ~ 23972841 (+) |
| AMCG00016507 | ccdc58,LOC107733097 | coding | upstream | 139272 | 23925791 ~ 23934450 (+) |
| AMCG00016509 | NA | coding | upstream | 160289 | 23904004 ~ 23913433 (+) |
| AMCG00016503 | NA | coding | upstream | 258212 | 23768136 ~ 23815510 (+) |
| AMCG00016520 | naa50,LOC107732992,LOC106590472,LOC106579447 | coding | downstream | 12544 | 24089830 ~ 24101565 (+) |
| AMCG00016519 | NA | coding | downstream | 27619 | 24104905 ~ 24118373 (+) |
| AMCG00016529 | NA | coding | downstream | 247664 | 24324950 ~ 24336827 (+) |
| AMCG00016536 | NA | coding | downstream | 491842 | 24569128 ~ 24580184 (+) |
| AMCG00016541 | sms,LOC106603082,LOC107700049 | coding | downstream | 504691 | 24581977 ~ 24597847 (+) |
| G13979 | lipt2 | non-coding | upstream | 207922 | 23862215 ~ 23865800 (+) |
| G13953 | NA | non-coding | upstream | 726010 | 23347427 ~ 23347712 (+) |
| G13949 | NA | non-coding | upstream | 747962 | 23325560 ~ 23325760 (+) |
| G13943 | NA | non-coding | upstream | 961557 | 23111926 ~ 23112165 (+) |
| G13939 | NA | non-coding | upstream | 1062853 | 23010646 ~ 23010869 (+) |
| G14132 | NA | non-coding | downstream | 240514 | 24317800 ~ 24321319 (+) |
| G14136 | NA | non-coding | downstream | 259684 | 24336970 ~ 24338848 (+) |
| G14127 | eif1ax,EIF1AX,eif1axb,LOC105905255,LOC106563585,LOC106590461,LOC108411992 | non-coding | downstream | 293040 | 24370326 ~ 24375827 (+) |
| G14177 | NA | non-coding | downstream | 342072 | 24419358 ~ 24419607 (+) |
| G14354 | NA | non-coding | downstream | 1044797 | 25122083 ~ 25122392 (+) |
| AMCG00016506 | NA | other | upstream | 128698 | 23938051 ~ 23945024 (+) |
| AMCG00016502 | NA | other | upstream | 190776 | 23866267 ~ 23882946 (+) |
| AMCG00016490 | atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 | other | upstream | 2241574 | 21782106 ~ 21832148 (+) |
| AMCG00016429 | lamtor1,LOC106581407 | other | upstream | 4193997 | 19875056 ~ 19879725 (+) |
| AMCG00016407 | NA | other | upstream | 5600033 | 18419017 ~ 18473689 (+) |
| G14057 | NA | other | downstream | 2731 | 24080017 ~ 24110182 (+) |
| AMCG00016537 | NA | other | downstream | 402420 | 24479706 ~ 24561807 (+) |
| G14326 | NA | other | downstream | 930676 | 25007962 ~ 25010687 (+) |
| AMCG00016558 | rpl21,LOC107591224 | other | downstream | 1003388 | 25080674 ~ 25085097 (+) |
| G14361 | NA | other | downstream | 1055912 | 25133198 ~ 25133879 (+) |
