AMCG00016530


Basic Information

Item Value
gene id AMCG00016530
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 24338444 ~ 24354199 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016530
GACAGCCACACCGGTGAAGGCAGATGCTCGCCAGCCCAGTGATGCAGCCCGTGTCATTTACATAGcggtgcaagtgtgtgtgtgtgtgtgagtgtgtgtgagcgagTGTGTGAGCGAGTGTGTGCGTGCTTGTCTGCCTGGCTGCTGGAGTGACGGTGCGTCTGCAGAGGAGAGGGGGGCTGAGCCGTGTGCCAGGGCTGGGTGTGCTGATTGCAGAGCTCTGCCTGCCGGTGCTGTTGGGTAGGGCTTCCCAGCAGAGCGAGAGAGCCACTGCTTGCTCACCTGCCAGCTACCTCTCTCCCTGCCCGGCGCTTTCACAAGGCTATTTATTATTACTCCTTTCCATCATTGTCGGAGTCATCCTCTTAGTCTTCTGCACTACGGACCtgagacagagaaaaaagacagagaggaggggagcaactaaacagaaaaaacaaaagaaaaggaaaaaggagaaTTATAAAGTGAAGAAGGGGGAGCGTGTGAGAAAAACCACCAAATGCAGCAGCCCGCTTCCGCCCCCAAGGGCCGCAGCGATGGCTCAGTCAGAGAATGTCTGTTCTTCCCTGTGTTCGAACGCAACGAGCAGGAGCGGCTGGAGGCCCTGATGCGCAGGTCTCTGGAGCGCAGTCTGCAGCTGGAGCAGAGGCCCAAGCGCTGGACCTGGGGCGGGGCCACGGGGACCGGTCCGGCAGCCAGAGAGGGTGACTGTGAAAATGCCCCGCCCCTTCCTGTAGGTTTACCCAGCGCCTCCGCCCCTCCTCCTGAGCTCGCTGCCCCCTCTCCTGCGGTGCCCTCCGAGCCCTTCAATGctCGCCGGCTGCACCTCAGCCCCCTGGAGAATCTGCTAGTCAGTCGGCTGCTCACCCCCACCCACTCTTCCCTCGCTCGCTGCCGGAGTGAGGCTCACCTCGGCCAGCCTTGCCGCCTTGGGCCCCCAGCCCCCCCCAGCCCACACAGGTCCCCGTACCGCGGCTCTCCGGGCAGGGCCGAGCGCAGGAAGACGTCCGCTGGCTCCCCGGGCTCCTCCGAGGACTCTGCCggcacccccccgcccccagaCACCCCCAAGAGGGAGACGGAGAGGCTGAAGAAGGAGAAGCGGCCGTCCTGCCCTGTGCCGGGCTCCCCGATGAGACGGGTTGACGCCCCCGCCGGCATGACCACGAGCAAGAGGCCCGCCTCCCCAGCCACGCCCAAGTTGGTGTCGAAGACTCGAGCCCAGTCGCCCTGCACGGTCAAGCAGTACCCCCCCTCTCCCATGAGGCACCGCGCCACCACCCCTGGGTCAGACAATGGGAAGAAGAAGAGTGACAGGGGCGAGGGGGCTGCGCTGGACAGACGTTTGGAGGAGGCCCTGGGCACAGAGATGCCCGAGAAGAAACTGCCCAAGTCTGCCAGCAGTGACCTGAGTgccagggagggaggagagaggagtgCAGagCCGTCCCCAGTGACACCCACGGGGAAGGCGATCGCCGGCACCACGGATGCGGAGGAGGCATCACGGCTGCTGGCGGAGCGGCGGCGTCAGGCCCGGCTGcagaaggagctggaggagcggCAGCGGCGCGAGCAGGAGGAGGCCGAGAGGGTGAAAGCAGAGGCCTTGCGGATTAAGATGGCGGAGGAGCGGGcgaggcaggaggaggaggcccGGCGCGCCGAGgagcagaggcagaggcaggagctggagcagagGCAGCgcgaagaggaggagaggaggcagcgcgagagggaggagagggagctgCAGAtccagctggagagagagAGGGAGGAGGCCGAGGTCAAGGCCCAGCAGGAAGCGGAGAGGCTGCGCCAGGAGAGGGAGTTGCTCCAGCTGCAGGGCGAGCAGGAGAGACTGCAGAGGAAGAAGAGGATTGAGGAGATCATGAAAAGGACCAGGAAGAGCGACGCGTGCGAGAAGAAGGACGAGGGGAAGCTGGAGGGGCTGCCTGCTGTGAtgaACGGGCAGGtgctgtctgtgctgcaggGGACAGGGGTGAAGGCCAGGGGGGGGCCCTCTCCCCCAGCGGCCAGAGAGGCTCTAGCACCCCCCCTCATCAGCCTGCAGCCGCTGGACATGAAGAGCAATGAGCTCGTCTCCCTCCCGGACTTCTCTCCCGTCAACGAGATCCACCACAATGGCATGAGCAACTCCAAGGCCCTGGAGGACCTGCTGGATCTGACGGGCCACATCGCCTACCCCAAGCTGGGCGGCCCCCCTCCCGGCCTGGGTGACTGCAACAAGAACCTGATCGAGGGGTTCTGCACCTCCAGCTCAGAGACCCAGCTCATAGAGTCCTTGGCCCAGTCTGTGGACAAAGCCAACGTCCAGGCTCTGGAGACGGGCAGCGCCGCGCTCAGGCGGGTACAGCGGGGGATTCCTCGTCCTGCCGGCGCCGGGCACGGGGGGCAGGAGAGCAGTGCTGAATGTAGTTTTATCTCCCTCTGAATCCGCACTCCGCTAATAATGTGCATCAGAGCAGAAACCCTGAACCCACTTCGCCATGACAGCAGTCAGGAggacagctgtgtgtgtttatagggACTCGCAGATGaagatgttatttttgttatatatatttagttttatttcatttgttctGGTTTCGACATATTTATTGCAGGTGACATCAAGAAACCACCACTGTGACAGGATTAtgtttattgctttgtttttatttttgaaggagggagtattttattatatataatgtatatgtatatatatatata

Function

GO: NA

KEGG:

id description
K24203 MAP7D2; MAP7 domain-containing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016530 True 2745 mRNA 0.61 14 24338444 24354199

Neighbor

gene id symbol gene type direction distance location
AMCG00016533 NA coding downstream 34130 24290694 ~ 24304314 (-)
AMCG00016527 NA coding downstream 68193 24250117 ~ 24270251 (-)
AMCG00016528 NA coding downstream 88867 24247182 ~ 24249577 (-)
AMCG00016526 NA coding downstream 95069 24215947 ~ 24243375 (-)
AMCG00016525 LOC107580614 coding downstream 124785 24197885 ~ 24213659 (-)
AMCG00016532 NA coding upstream 1712 24355911 ~ 24363038 (-)
AMCG00016535 eif1ax,EIF1AX,eif1axb,LOC105905255 coding upstream 17870 24372069 ~ 24375807 (-)
AMCG00016534 NA coding upstream 21668 24375867 ~ 24392855 (-)
AMCG00016539 NA coding upstream 194178 24548377 ~ 24550125 (-)
AMCG00016546 LOC108276628,LOC107663623 coding upstream 366990 24721189 ~ 24739122 (-)
G14171 NA non-coding downstream 1617 24335944 ~ 24336827 (-)
G14093 NA non-coding downstream 173024 24165157 ~ 24165420 (-)
G14092 NA non-coding downstream 190767 24147399 ~ 24147677 (-)
G14016 NA non-coding downstream 395066 23942044 ~ 23943378 (-)
G14015 NA non-coding downstream 396906 23941318 ~ 23941538 (-)
G14181 NA non-coding upstream 70965 24425164 ~ 24425498 (-)
G14213 NA non-coding upstream 247499 24601698 ~ 24602007 (-)
G14214 NA non-coding upstream 251909 24606108 ~ 24606321 (-)
G14218 NA non-coding upstream 261588 24615787 ~ 24618345 (-)
G14222 NA non-coding upstream 328866 24683065 ~ 24684535 (-)
AMCG00016531 NA other downstream 14986 24309256 ~ 24323458 (-)
AMCG00016505 NA other downstream 453186 23864581 ~ 23885258 (-)
AMCG00016504 NA other downstream 475705 23841062 ~ 23862739 (-)
G13969 NA other downstream 638189 23699149 ~ 23700255 (-)
G13962 NA other downstream 882633 23455092 ~ 23455811 (-)
AMCG00016538 smpx,LOC107721880,LOC107590224,LOC107663668,LOC107705278 other upstream 199493 24553692 ~ 24566956 (-)
G14305 NA other upstream 526949 24881148 ~ 24882098 (-)
AMCG00016562 rnf6 other upstream 653775 25007974 ~ 25015343 (-)
G14392 NA other upstream 726369 25080568 ~ 25083699 (-)
AMCG00016579 NA other upstream 910573 25264772 ~ 25277478 (-)

Expression


Co-expression Network