AMCG00016543


Basic Information

Item Value
gene id AMCG00016543
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 24712332 ~ 24719584 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016543
ATGTCTTCCACAACAAGCCACCCCCCCAGCGctaacaccaccaccaccaccaacgcCACCACCACAGCTGTGGACGGTGCACTGAGCGATGTGAACAACCTCCTAAAAAACACCAGCAACGTGTCTTCTCTGAATGCGGCCGAGATTGAGAGCCTGGTGAACAAGCTGGTCGCCCTGGTGAACCATACACCTAACATCAGCCAGGATCTTGGCCACGTGGTGGTGGACGTGGTCAGCAACCTTCTCAACGCCTCGGCAGAAAACCTGGCTTCCTCCTCCTCTAACACTGACTTCACAACCCTGAATTCCACGTCTCTGGCTCTGGCCGTGCAGAGGGTCAACAGCAGCAACTTCAAAGAGATTTCCTTCTCCATCGCAGACCCCACCAACCTGCAGGTCAGCGTGACAGGCCAGGCCACCACCAGAGTGAGGAGAGACGGGGAGGGTGATGTCCGCAGCTCCACGACGGCCGCCTCCATCACCTTGCCTGCCTCCCTGATGAGCAGCCTGTCTAGCGAGGAGCACAAGCTGGCCTCCAGGGTGCAGTTCCAGTTTTTCCAGAAGAGCACTCTCTTTGGGGGAGACTCCAATTCACTGAACAGTTACGTCCTCGGGACGAGCGTAGCCAACCTGTCGCTGAGTGGGCTAAGAGACAACGTCACTTTCACCCTCAGGAATCTCAAGCCCCCAACAGAGAACGACAGTGTCAAGTGCATGTTCTGGGATCTCACAAAGAATGGAGGAAAGGGGGGCTGGAATGAAAAAGGCTGCACTGTGGCCAACTGGACAGCTGAAGAAACCATCTGCAGCTGTAACCATCTCACAAGCTTTGGAGTTCTTTTGAATCTGCAGGAGCAGGTGGAGTCGGACCCCAATAATGTACTCATCCTCACCTTTATCAGTTTCATTGGCTGTGGAATCTCTGCCATCTTCCTCTCCATCACACTGATGACCTACATCATCTTCGAGAAGCTGCGTGCCCCTCTGATTGTggtcattattgttattgctgtCAACAAAAACTTCTATGGGCTCGGACACTATGGAAAATTCCCAAATGGTGCAACGGATGATTTCTGCTGGATCCAGAAAGAAACGGTGTTCTACGGGTCAGTGGTGGTGTACTTCTGCCTGGTGTTCCTGCTCAACCTGTCCATGTTCATCACCGTCATGGTGCAGCTGTGCCGGATCAAGCGGCAGAGTCCCCACAGCTCGCGCCAACACAGCACCACCACGAGCAGCCTGCGCAGTGCAGTCAGCCTCACATTCCTGCTGGGCCTCACCTGGGGCTTTGCCTTCTTCGCCTGGGGCCCCGTCAACCTGCCTTTCATGTACCTGTTCGCCATCTTCAACACCCTGCAAGggtttttcattttcattttccactgcGCCTTGAAAGAAAACGTCCGCAAAGAGTGGAGAGCACACCTGTGCTGTGGGAAACTGCGGACGGCGGAGAATGAAGACTGGAGCCAGACAGCTTTGCAGAAGACGAGGAAGCAGCCCGTGACGGGGGGTGCCTCCTTTCACTCCTCCGACTCCACCAACTCCACCTCCTTCCTCGTGAGCGACAGCAGCGGCCCGAGCAATGAGTTTGGTAACCCCTATGAAAACATTGCCATCGCACCACTGACTGACCCCAACTTTGACGTTCTGCTGAATGAGGTTTTCAACAACAGAGCGATGCAGAAAAAAGAACATTGA

Function

GO: NA

KEGG:

id description
K08451 ADGRG2, GPR64; adhesion G-protein coupled receptor G2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016543 True 1704 mRNA 0.54 14 24712332 24719584

Neighbor

gene id symbol gene type direction distance location
AMCG00016547 NA coding upstream 101 24700745 ~ 24712231 (+)
AMCG00016540 NA coding upstream 29132 24669212 ~ 24683200 (+)
AMCG00016542 LOC107663624 coding upstream 94801 24601700 ~ 24617531 (+)
AMCG00016541 sms,LOC106603082,LOC107700049 coding upstream 114485 24581977 ~ 24597847 (+)
AMCG00016536 NA coding upstream 132148 24569128 ~ 24580184 (+)
AMCG00016544 NA coding downstream 23762 24743346 ~ 24761109 (+)
AMCG00016548 plcxd2,LOC103047596,LOC105905211,LOC107663676,LOC108414136,LOC107671354,LOC108256473,LOC107586725 coding downstream 92266 24811850 ~ 24823512 (+)
AMCG00016549 NA coding downstream 106025 24825609 ~ 24866424 (+)
AMCG00016554 nup58 coding downstream 175518 24895102 ~ 24910014 (+)
AMCG00016553 NA coding downstream 192427 24912011 ~ 24920036 (+)
G14177 NA non-coding upstream 292725 24419358 ~ 24419607 (+)
G14127 eif1ax,EIF1AX,eif1axb,LOC105905255,LOC106563585,LOC106590461,LOC108411992 non-coding upstream 336505 24370326 ~ 24375827 (+)
G14136 NA non-coding upstream 373484 24336970 ~ 24338848 (+)
G14132 NA non-coding upstream 391013 24317800 ~ 24321319 (+)
G13979 lipt2 non-coding upstream 846532 23862215 ~ 23865800 (+)
G14354 NA non-coding downstream 402499 25122083 ~ 25122392 (+)
G14363 NA non-coding downstream 424998 25144582 ~ 25144782 (+)
G14383 NA non-coding downstream 550254 25269838 ~ 25270195 (+)
G14444 NA non-coding downstream 638303 25357887 ~ 25359035 (+)
G14445 NA non-coding downstream 640887 25360471 ~ 25360808 (+)
AMCG00016537 NA other upstream 150525 24479706 ~ 24561807 (+)
G14057 NA other upstream 602150 24080017 ~ 24110182 (+)
AMCG00016506 NA other upstream 767308 23938051 ~ 23945024 (+)
AMCG00016502 NA other upstream 829386 23866267 ~ 23882946 (+)
AMCG00016490 atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 other upstream 2880184 21782106 ~ 21832148 (+)
G14326 NA other downstream 288378 25007962 ~ 25010687 (+)
AMCG00016558 rpl21,LOC107591224 other downstream 361090 25080674 ~ 25085097 (+)
G14361 NA other downstream 413614 25133198 ~ 25133879 (+)
AMCG00016566 NA other downstream 430764 25150348 ~ 25157461 (+)
AMCG00016584 NA other downstream 650712 25370296 ~ 25404840 (+)

Expression


Co-expression Network