AMCG00016556


Basic Information

Item Value
gene id AMCG00016556
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 24930817 ~ 24953633 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016556
ATGGTGGCTCACAGCCAGATATATGGAAACCCGTTTGAACCCCTCGCAGAAACTGAGGGGACTGAGATAGGGCGGACTGTGGAGCCAGGACCAAGcagggagcaggaggaggagcctCTCAGACCTTCGAAGGGAGCATGGCGGTCCTCCTGGCTGCACTTCAGTGTGGGAAACAAcgccCTGGTTTCGGTCATCAGGCACGTACACCACTTTCAGGTCTTAATATTGGTTGTGTTTCTGCTGAGCGCTGTGAGGACAGAGTTTTCGGGAAGCCAGGGGGCAGGCACTGCTGTTCAGTACGGGGATCGGCTGCCGGCAGAGTGGGCGGAGGGCGGAGGAAACAATGAGGCTCCTGCCCTCGCAGATGGGCCTGGCGCGCTGACAGGCCTCCCTGCCCCAGTGACAGTGATGTATGGCTGCACTCTGGTCTGGGCCACTCAGGGCTCCGTGCGTTTTTTCACAGCCGTTCTGGACAGGGGCTGGGGTTTCTCCGGCGGTGTGGGGTGGCTGCCTCTCTTGGGTTTCCAGTCTGAACCAGAGAGACGCTGTCGGACTCCAAACCCCAGCGTGAAAACTGCCCCAGTCCTCTTCCGCGACGATGCTCGGGTGTCTCCGCTGCAGAAGTCCGAGATAGTGGACATGGTGAAGAAGCACGTGAACGCCATCACTCTGGCCATCGGGGACGGCGCCAACGACGTGGGCATGATCCAGACGGCGCACGTGGGCGTGGGCATCAGCGGCAACGAGGGCATGCAGGCCACCAACTCCTCTGACTACTCCATCGctcagCTGTGGTTTGCATTCGTTAATGGATTTTCTGGTCAGATTCTGTTTGAGAGGTGGTGCATTGGGCTGTACAACGTGGTGTTCTGGGGTCACTGCATCAACGCCTTGGTCCACTCCATCATTCTCTTCTGGTTTCCCTTGAAAGTGCTGGACCACGACTCCGTGTTCGATAACGGTCACGCCACCGATTACTTGTTCGTCGGGAACATTGTCTATACGTATGTGGTGGTGACCGTCTGTTTGAAAGCTGGCCTGGAGACAACAGCCTGGACCAGATTTAGCCACCTGGCAGTGTGGGGCAGCATGCTGCTGTGGATGGTGTTCTTCGCCGTGTACTCGGCCATCTGGCCCTCCATCCCCATCGCGCCGGACATGCTGGGACAGGCTGGCATGGTGATGAAATGCTGGAGCTTCTGGCTGGGTCTGGTTCTTGTTCCCATCGCCTGCTTACTGAAGGACATAGCCTGGACAGCGGCCAGACACACCTACAGGAAGTCTCTGCTGGAGGAGGTTCAGGAGCTGGAGGCGCGGGCGCAGGACCCGGGGGCAGCCGTGCTGAGAGACGTCAACGGACGCAggagggagagaaggaggaaaggggaggaagagagggagaggagagggaaaatttggagaaggagaaggagggacAGGGAAATGGAGGAAAGGGAACAGGGGGAGGAAGAGgcatag

Function

GO:

id name namespace
GO:0006811 ion transport biological_process
GO:0016787 hydrolase activity molecular_function
GO:0043167 ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016556 True 1479 mRNA 0.59 13 24930817 24953633

Neighbor

gene id symbol gene type direction distance location
AMCG00016555 mtmr6,LOC104951663 coding downstream 36398 24883903 ~ 24894419 (-)
AMCG00016552 NA coding downstream 52590 24875864 ~ 24878227 (-)
AMCG00016551 NA coding downstream 120905 24802736 ~ 24809912 (-)
AMCG00016550 NA coding downstream 130623 24790148 ~ 24800194 (-)
AMCG00016545 NA coding downstream 144407 24762569 ~ 24786410 (-)
AMCG00016564 LOC107584968 coding upstream 19414 24973047 ~ 25001455 (-)
AMCG00016565 NA coding upstream 102927 25056560 ~ 25057570 (-)
AMCG00016563 usp12,usp12a,LOC107705210,LOC107591222,LOC107584971 coding upstream 119537 25073170 ~ 25080493 (-)
AMCG00016570 NA coding upstream 152699 25106332 ~ 25107565 (-)
AMCG00016569 NA coding upstream 171150 25124783 ~ 25133808 (-)
G14311 NA non-coding downstream 24271 24905121 ~ 24906546 (-)
G14245 NA non-coding downstream 150551 24716726 ~ 24780266 (-)
G14222 NA non-coding downstream 246282 24683065 ~ 24684535 (-)
G14218 NA non-coding downstream 312472 24615787 ~ 24618345 (-)
G14214 NA non-coding downstream 324496 24606108 ~ 24606321 (-)
G14400 NA non-coding upstream 168457 25122090 ~ 25122375 (-)
G14472 NA non-coding upstream 451262 25404895 ~ 25405101 (-)
G14487 rpl19,LOC101068736,LOC103368168 non-coding upstream 563356 25516989 ~ 25520096 (-)
G14496 NA non-coding upstream 589413 25543046 ~ 25545725 (-)
G14507 NA non-coding upstream 651147 25604780 ~ 25609059 (-)
G14305 NA other downstream 48719 24881148 ~ 24882098 (-)
AMCG00016538 smpx,LOC107721880,LOC107590224,LOC107663668,LOC107705278 other downstream 363861 24553692 ~ 24566956 (-)
AMCG00016531 NA other downstream 607359 24309256 ~ 24323458 (-)
AMCG00016505 NA other downstream 1045559 23864581 ~ 23885258 (-)
AMCG00016504 NA other downstream 1068078 23841062 ~ 23862739 (-)
AMCG00016562 rnf6 other upstream 54341 25007974 ~ 25015343 (-)
G14392 NA other upstream 126935 25080568 ~ 25083699 (-)
AMCG00016579 NA other upstream 311139 25264772 ~ 25277478 (-)
AMCG00016591 NA other upstream 459683 25413316 ~ 25420371 (-)
G14534 NA other upstream 799362 25752995 ~ 25754472 (-)

Expression


Co-expression Network