AMCG00016562 (rnf6)


Basic Information

Item Value
gene id AMCG00016562
gene name rnf6
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25007974 ~ 25015343 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016562
CAAGCAGGAGTGGTTTCCGTGGCGATGGACCCTCCCAGCCCAGCGGCAGACCGCGCGGCCGGCGGGCTGGATGAGCGGCGGCGGCAGCAAGAGCGGCTGCACCGTGAGGAGGCATACTACCAGTTCATCAATGGGCTGAGCGAGGACGAGTACCGGCTCATGAGGGACAGCAACCTGCTGGGCACGCCAGGTGAGGTGACCGCGGAGGAGCTGAGGCAGCGACTGGATGGGGCAAAGGAGCGCCTGTCCTCTCAGCCCAGCGTGGATGCCGGCCCACCTGCAGAGGAGGACAGCAGCAATGGAGCCGGTGAGCCAGCTGGGGAGGCCTCGAATGGTGACTCTCTCCTGGAGTGGCTGAACACGTTCCGGCGCACGGGTAATGCCACGCGCAGCGGGCAGAGTGGCAATCAGACGTGGCGTGCGGTGAGCCGCACCAACCCGAACAGCGGTGAGTTCCGCTTCAGCCTGGAGATCAACATCAACCACGAGCAGCCCGAGCCGGCTGAGCTTGACCCGGGTGACGCCCCTCCGGCCTCACTCACcgccccccaccctccaccaCGGGTCACCCAGGGCCGCCGAGCGCAGGCAGCCGCGGCCAGGAGAACACGCGGTAGCCTGGCCCCGCCCTCCCCAGACCCCCCTGCTGGCAGGACGCGCAGCCTGCGGAGGAGCGAGGTCCCgctgccccccaccccagccccaCCCCGCCGCGCACGGACCAGTGGGGGCCGGCGTGGTCGTGCCCGCCTCTCCCCTCGCCCACAGACTCTCGGCGCACAGGAGCCGCCCACAGACTCTCCGGCCACGCCGCCCTGCCCCCGAGTGCTGCCTGAGCTCCAGCTGCAGGGGGAACCAGCGCCGGCCACCGCCCCGCTCCGCAGCAGCAGGACTAGAGCCCGGGGCCGGGGCGGGCGGGGCGGGCGGGGCGGGGCGTCCCACAGCCAGGCCGGGGGGAGAAGCCGCTCTCCGCTGCGCAGGGAGCCGGGCGAGACGGCCCCTCCATCACccagggagggggagggggagggggcaggagaAACTGTGACTGCGGGTGGGGTAGGGACTCTGGGGGTCGCCATGGAGACCGAGCAGCCAGCCAGGGAGCCGGGCGCCGCCCCCGTCACGGCGCCTCCTCCGCCCGCCCCAGAGGGCgcagtggaggagggggaggcgCAGGTGGCGGGGGCGGCCGGGGCTGGGGGCGGCAGCATGCGTCGCCATCCCACCATCATGCTGGACCTGCAGGTGCGGCGCATCCGGCCGGGGGAGAACCGCGACCGCGATAGCATCGCCAGCCGCACGCGCTCACGGGTGCGCATGGCCGAGAACACGGTGACCTTCGAGAGCGACAGCGGGGGCTTCCGCCGCACCATCTCCCGCTCGGAGCGCGCCGGCATCCGCACCTACGTCAGCACCATCCGCATCCCGCTGCGCCGCATCTCCGAGACCGGGCTGGGAGAGCCGTCCTCCACCGCGCTGCGCTCCATCCTGCGCCAGATCATGACGGGCTTCGGGGAGCTCAGCTCGCTCATGGAGACCGAGGCCGACTCTGAGGCGGCCGCTCCCGGGCTGGAGGGCGGCGGTGGTCCGGCCGTGCAGACCTTCCGCGTCCACGCCAACGACGGCCCGGTGCCCCGAGACGCCGTAGAGCGCCGTGGGGTGGacggggaggtgggggtgggggtgggggtgggattGGCATCGGCAGCagaggaggacgaggacgacgaggaagaggaagagggcGAGGAGCGGCGGCTGGGAGGAGGGGGCAATGCCCAGCTGGCGGGGCAGCAGCAGGGCGAGGGCAGACAGGCCCACAGGGACACCAACAACCTGGTGGAGAACGGCACGCTGCCCATCCTGCGGCTGGCGCACTTCTTCCTGCTGAAtgacgaggaagaggaggagcacCCGCGCGGGCTGAGCAAGGAGCAGATCGACAACCTGTCCACGCGCACCTACGGCCTGGCCAGCCTGGAGGGGGAGCTGGGCCGCACCTGCAGCGTCTGCATCAACGAGTACGCCCAGGGCAACAAGCTGCGCCGCCTGCCCTGCGCCCACGAGTTCCACATCCACTGCATCGACCGCTGGCTGTCCGAGAACAACACCTGCCCCATCTGCCGCCAGCCCATCCTGCAGCCTCCCCACGACTGA
>TU17761
agaggaggacgaggacgacgaggaagaggaagagggcGAGGAGCGGCGGCTGGGAGGAGGGGGCAATGCCCAGCTGGCGGGGCAGCAGCAGGGCGAGGGCAGACAGGCCCACAGGGACACCAACAACCTGGTGGAGAACGGCACGCTGCCCATCCTGCGGCTGGCGCACTTCTTCCTGCTGAAtgacgaggaagaggaggagcacCCGCGCGGGCTGAGCAAGGAGCAGATCGACAACCTGTCCACGCGCACCTACGGCCTGGCCAGCCTGGAGGGGGAGCTGGGCCGCACCTGCAGCGTCTGCATCAACGAGTACGCCCAGGGCAACAAGCTGCGCCGCCTGCCCTGCGCCCACGAGTTCCACATCCACTGCATCGACCGCTGGCTGTCCGAGAACAACACCTGCCCCATCTGCCGCCAGCCCATCCTGCAGCCTCCCCACGACTGACAGACCGGCCAACCAGCGGCctggaaccccccccccccgccccgcctGAGTCCCCACCCCCCAGGGGACGTCTGTAAATACCGCTTTACTGTTATAACTATAAGATCCATTGTAATGAGCTGAAGGTAGAACCAAAAACATATGAGAAACAAACAAGGACatgcaacacaatacaacacgACAGGAGGAAactaaagtatatttttttagactttttagttttgtttttttgagttgttttttttccctctcttttttttttcccttttctttctttagatgCATCCGTTTACTACAGAATATCTTCCCAGCTTCACTTTTCATTCCTGTGCTGCTTCATAGAGGTCGATTGTTACAGGTTTTATCAGAGgaactaaaaaaactaaaagacgCTAGCAAACAGACACCTAGTGTGTAACCTTGACATTaacatattactgaaaataatggTTTAGGTTTTAGGTCACAGAGACTATAAACAAACCCAAGTCTGATCTGGAATACATTAAATAGTGACTGTCCTCTTTGGAccattacaacaacaataacaataaaacagtaggATTAACGGGTTTAAGTCCCCTCCATCTCTGCTTCATTTCAAACTCCAGACACACGACACGCAGGGCTGCCAGTCTTGGACGCCCAGCCCTCGGTTCAGCTGGAAGGCACGTTGAACAGTTTCACACGGACACCGTTGGCCTCCTGTCTCATTCTTAACGAAGGTAGAAATTCCTGAAGCTTGAAGACTGTagtgtttcttttatttccttttgtttggttttatttatttttaacccctGGTGACCCTGGGGTCCAGTCAGAGTGTGACCTGCCGATCAGCCGGCGCTGTTGGCAGGATTGCTGCCTAATAGAGCTGTATTGATTTTCCCAGCACATGGAGCAGAGAGGAAATATCCACAATGCAGCCTCGTAGAACGGTGGCGCGGAGTGATGGCCAGAGTCCAGCCCCTGTGTGGCGCCTGACCAGCTCCCTATCGCTGTGCTGATTGGCTGTCTAGGAGGATATAAATGGGGCAGAAAGCTCTGCATTGATTTCCCTGCTCATTAGCAGCCAGGTCACCCGGGTTCAGACATAACCTGCAAAGAGTTCGTGGTTACAAATTCCAAACGTTGTCCTTGACGTCCTGGAGAGGCAGGATGAGACCTCTAGGGCAAGTGTGGAGGCAGTGAGGGCCGGAGCCCAGGCCAGGGGGCTCCAGAGCACGGCTCCGGGGCTGTGTACTTCCTGGACATTGTGTGCCCACTCCGTCTAGATGGTTCCCTCTAGGGCAGTAGCTGTGCGCCACGTTTGAGGGCAGAGGGCAGCGGAAGATGCTTGCTGGTGACATGCCAGTATGGGCTGAGTGTCGTCCTTCTGGGAGATGCGCTTGCTGCAGGGCCAACTAAAACCCAGTGACTTgaactttttttaatggtttaattttacagttatttgtaatgttttaattacgAGTGTACCATTACAGCACTTGACGGTCTGAATCCCTGTTCATCTAACACAGGCCTCATGTAGCCTGAACTGCCGCCCATTCCATGccaatttattaaattaattattcaattgaGTAAACCCCTCTGCACTCTCCTGGGTCTAATGAAGGTGTTGATCTAGACCCCCCTGTGTATTGAGCCTGTGGGGATTTGGCCGGGAGGACAGTGGCTGGCACAGCGCTGGTCTGAGTGGACCGCCGGCCGGGAGACGTTGGCGAGCACCTCGGGGTCTGGGGTGCTATCCTGTGCGCCTGCTGGGGTCTGTTCTCCAGTCGGGATGTGTCAGGGGGCCCTGCAGGCACTTGGGCAAAACACCTGTGAGAGACTGCAGTTCGCAAGCCTgacccttttattttatttgtattatgatttcTGTATCTGTTCTTAATCCACACTACTGTTCGGGACATGGCGTCCTGTGTTCGTTGTGAAAGATCCAATTCTATGGTGCAGAGTCCTCCACGCTCACCGTCTGTAAGGCAGGAATGCAGACTGCCTGAACCATGTTTCATCAGGGCCAGTGGGGCTCTCCCTTTCAggttatttattaaacacataGGAAAATTGCACCAGTATTGTCCCTCGTTCTTGTGTTGGGTTTGTTTGTTCGGAATGGGTGGGTAGATTCCAGTGAGTGAACTTGCACCCTTTCAAACCATATCTGGATCAACATTTTGTTAAGGCGTGATTGGTTAACTGTCTATCTGGGTCATAGGCACTGTGCTTTACAGTGTGACCTGGGAACCCCAAGGTTGTGTGTTTCATGTGCAGGATCACAAAAGCACCACAAGAGGGCATTATCTGCATTATTAGGACTATCCCTGAAGTTGAAAAGGGATTTCCCTGCGTAGACCACTGCCTTAAAGACTTGCAGGCATTTTTATAATGGGTGGCAGGGAGCAAACAAGGATGCAAATGTCcccatttattttccactggttGGCTTTTGCAGTCACAATAAGGTATCATGGGGGAAGGGAgttcttaaatgtttaaaatgagcaCTGATTTTAGCAACTGCCCCCGTTTTCTACATGCATGCTGTAGTCCGTGTTAAGAGCAGAGGTGAAGCCAGGAGCCTTGTCCTCTTGTCTTGTTGCTTTAGCCTGCCCCCTGTCCATCTGCGCTGATGCTGGGGTCATGATGAAGGGATGATTGGAATGTATGTTGAAAGTGTtgaagatctctctctctctctctctctctctctgaatatCTACCTTTTTAAACTCTTCAGCTGCCTCTGGGAACTCCCCACAGGCTCATCTGGTATGATGTTTCAGAAACCTATAAATATGTATTCGATGCTAATTTAATTA
>TU17763
agaggaggacgaggacgacgaggaagaggaagagggcGAGGAGCGGCGGCTGGGAGGAGGGGGCAATGCCCAGCTGGCGGGGCAGCAGCAGGGCGAGGGCAGACAGGCCCACAGGGACACCAACAACCTGGTGGAGAACGGCACGCTGCCCATCCTGCGGCTGGCGCACTTCTTCCTGCTGAAtgacgaggaagaggaggagcacCCGCGCGGGCTGAGCAAGGAGCAGATCGACAACCTGTCCACGCGCACCTACGGCCTGGCCAGCCTGGAGGGGGAGCTGGGCCGCACCTGCAGCGTCTGCATCAACGAGTACGCCCAGGGCAACAAGCTGCGCCGCCTGCCCTGCGCCCACGAGTTCCACATCCACTGCATCGACCGCTGGCTGTCCGAGAACAACACCTGCCCCATCTGCCGCCAGCCCATCCTGCAGCCTCCCCACGACTGACAGACCGGCCAACCAGCGGCctggaaccccccccccccgccccgcctGAGTCCCCACCCCCCAGGGGACGTCTGTAAATACCGCTTTACTGTTATAACTATAAGATCCATTGTAATGAGCTGAAGGTAGAACCAAAAACATATGAGAAACAAACAAGGACatgcaacacaatacaacacgACAGGAGGAAactaaagtatatttttttagactttttagttttgtttttttgagttgttttttttccctctcttttttttttcccttttctttctttagatgCATCCGTTTACTACAGAATATCTTCCCAGCTTCACTTTTCATTCCTGTGCTGCTTCATAGAGGTCGATTGTTACAGGTTTTATCAGAGgaactaaaaaaactaaaagacgCTAGCAAACAGACACCTAGTGTGTAACCTTGACATTaacatattactgaaaataatggTTTAGGTTTTAGGTCACAGAGACTATAAACAAACCCAAGTCTGATCTGGAATACATTAAATAGTGACTGTCCTCTTTGGAccattacaacaacaataacaataaaacagtaggATTAACGGGTTTAAGTCCCCTCCATCTCTGCTTCATTTCAAACTCCAGACACACGACACGCAGGGCTGCCAGTCTTGGACGCCCAGCCCTCGGTTCAGCTGGAAGGCACGTTGAACAGTTTCACACGGACACCGTTGGCCTCCTGTCTCATTCTTAACGAAGGTAGAAATTCCTGAAGCTTGAAGACTGTagtgtttcttttatttccttttgtttggttttatttatttttaacccctGGTGACCCTGGGGTCCAGTCAGAGTGTGACCTGCCGATCAGCCGGCGCTGTTGGCAGGATTGCTGCCTAATAGAGCTGTATTGATTTTCCCAGCACATGGAGCAGAGAGGAAATATCCACAATGCAGCCTCGTAGAACGGTGGCGCGGAGTGATGGCCAGAGTCCAGCCCCTGTGTGGCGCCTGACCAGCTCCCTATCGCTGTGCTGATTGGCTGTCTAGGAGGATATAAATGGGGCAGAAAGCTCTGCATTGATTTCCCTGCTCATTAGCAGCCAGGTCACCCGGGTTCAGACATAACCTGCAAAGAGTTCGTGGTTACAAATTCCAAACGTTGTCCTTGACGTCCTGGAGAGGCAGGATGAGACCTCTAGGGCAAGTGTGGAGGCAGTGAGGGCCGGAGCCCAGGCCAGGGGGCTCCAGAGCACGGCTCCGGGGCTGTGTACTTCCTGGACATTGTGTGCCCACTCCGTCTAGATGGTTCCCTCTAGGGCAGTAGCTGTGCGCCACGTTTGAGGGCAGAGGGCAGCGGAAGATGCTTGCTGGTGACATGCCAGTATGGGCTGAGTGTCGTCCTTCTGGGAGATGCGCTTGCTGCAGGGCCAACTAAAACCCAGTGACTTgaactttttttaatggtttaattttacagttatttgtaatgttttaattacgAGTGTACCATTACAGCACTTGACGGTCTGAATCCCTGTTCATCTAACACAGGCCTCATGTAGCCTGAACTGCCGCCCATTCCATGccaatttattaaattaattattcaattgaGTAAACCCCTCTGCACTCTCCTGGGTCTAATGAAGGTGTTGATCTAGACCCCCCTGTGTATTGAGCCTGTGGGGATTTGGCCGGGAGGACAGTGGCTGGCACAGCGCTGGTCTGAGTGGACCGCCGGCCGGGAGACGTTGGCGAGCACCTCGGGGTCTGGGGTGCTATCCTGTGCGCCTGCTGGGGTCTGTTCTCCAGTCGGGATGTGTCAGGGGGCCCTGCAGGCACTTGGGCAAAACACCTGTGAGAGACTGCAGTTCGCAAGCCTgacccttttattttatttgtattatgatttcTGTATCTGTTCTTAATCCACACTACTGTTCGGGACATGGCGTCCTGTGTTCGTTGTGAAAGATCCAATTCTATGGTGCAGAGTCCTCCACGCTCACCGTCTGTAAGGCAGGAATGCAGACTGCCTGAACCATGTTTCATCAGGGCCAGTGGGGCTCTCCCTTTCAggttatttattaaacacataGGAAAATTGCACCAGTATTGTCCCTCGTTCTTGTGTTGGGTTTGTTTGTTCGGAATGGGTGGGTAGATTCCAGTGAGTGAACTTGCACCCTTTCAAACCATATCTGGATCAACATTTTGTTAAGGCGTGATTGGTTAACTGTCTATCTGGGTCATAGGCACTGTGCTTTACAGTGTGACCTGGGAACCCCAAGGTTGTGTGTTTCATGTGCAGGATCACAAAAGCACCACAAGAGGGCATTATCTGCATTATTAGGACTATCCCTGAAGTTGAAAAGGGATTTCCCTGCGTAGACCACTGCCTTAAAGACTTGCAGGCATTTTTATAATGGGTGGCAGGGAGCAAACAAGGATGCAAATGTCcccatttattttccactggttGGCTTTTGCAGTCACAATAAGGTATCATGGGGGAAGGGAgttcttaaatgtttaaaatgagcaCTGATTTTAGCAACTGCCCCCGTTTTCTACATGCATGCTGTAGTCCGTGTTAAGAGCAGAGGTGAAGCCAGGAGCCTTGTCCTCTTGTCTTGTTGCTTTAGCCTGCCCCCTGTCCATCTGCGCTGATGCTGGG
>TU17765
cctGAGTCCCCACCCCCCAGGGGACGTCTGTAAATACCGCTTTACTGTTATAACTATAAGATCCATTGTAATGAGCTGAAGGTAGAACCAAAAACATATGAGAAACAAACAAGGACatgcaacacaatacaacacgACAGGAGGAAactaaagtatatttttttagactttttagttttgtttttttgagttgttttttttccctctcttttttttttcccttttctttctttagatgCATCCGTTTACTACAGAATATCTTCCCAGCTTCACTTTTCATTCCTGTGCTGCTTCATAGAGGTCGATTGTTACAGGTTTTATCAGAGgaactaaaaaaactaaaagacgCTAGCAAACAGACACCTAGTGTGTAACCTTGACATTaacatattactgaaaataatggTTTAGGTTTTAGGTCACAGAGACTATAAACAAACCCAAGTCTGATCTGGAATACATTAAATAGTGACTGTCCTCTTTGGAccattacaacaacaataacaataaaacagtaggATTAACGGGTTTAAGTCCCCTCCATCTCTGCTTCATTTCAAACTCCAGACACACGACACGCAGGGCTGCCAGTCTTGGACGCCCAGCCCTCGGTTCAGCTGGAAGGCACGTTGAACAGTTTCACACGGACACCGTTGGCCTCCTGTCTCATTCTTAACGAAGGTAGAAATTCCTGAAGCTTGAAGACTGTagtgtttcttttatttccttttgtttggttttatttatttttaacccctGGTGACCCTGGGGTCCAGTCAGAGTGTGACCTGCCGATCAGCCGGCGCTGTTGGCAGGATTGCTGCCTAATAGAGCTGTATTGATTTTCCCAGCACATGGAGCAGAGAGGAAATATCCACAATGCAGCCTCGTAGAACGGTGGCGCGGAGTGATGGCCAGAGTCCAGCCCCTGTGTGGCGCCTGACCAGCTCCCTATCGCTGTGCTGATTGGCTGTCTAGGAGGATATAAATGGGGCAGAAAGCTCTGCATTGATTTCCCTGCTCATTAGCAGCCAGGTCACCCGGGTTCAGACATAACCTGCAAAGAGTTCGTGGTTACAAATTCCAAACGTTGTCCTTGACGTCCTGGAGAGGCAGGATGAGACCTCTAGGGCAAGTGTGGAGGCAGTGAGGGCCGGAGCCCAGGCCAGGGGGCTCCAGAGCACGGCTCCGGGGCTGTGTACTTCCTGGACATTGTGTGCCCACTCCGTCTAGATGGTTCCCTCTAGGGCAGTAGCTGTGCGCCACGTTTGAGGGCAGAGGGCAGCGGAAGATGCTTGCTGGTGACATGCCAGTATGGGCTGAGTGTCGTCCTTCTGGGAGATGCGCTTGCTGCAGGGCCAACTAAAACCCAGTGACTTgaactttttttaatggtttaattttacagttatttgtaatgttttaattacgAGTGTACCATTACAGCACTTGACGGTCTGAATCCCTGTTCATCTAACACAGGCCTCATGTAGCCTGAACTGCCGCCCATTCCATGccaatttattaaattaattattcaattgaGTAAACCCCTCTGCACTCTCCTGGGTCTAATGAAGGTGTTGATCTAGACCCCCCTGTGTATTGAGCCTGTGGGGATTTGGCCGGGAGGACAGTGGCTGGCACAGCGCTGGTCTGAGTGGACCGCCGGCCGGGAGACGTTGGCGAGCACCTCGGGGTCTGGGGTGCTATCCTGTGCGCCTGCTGGGGTCTGTTCTCCAGTCGGGATGTGTCAGGGGGCCCTGCAGGCACTTGGGCAAAACACCTGTGAGAGACTGCAGTTCGCAAGCCTgacccttttattttatttgtattatgatttcTGTATCTGTTCTTAATCCACACTACTGTTCGGGACATGGCGTCCTGTGTTCGTTGTGAAAGATCCAATTCTATGGTGCAGAGTCCTCCACGCTCACCGTCTGTAAGGCAGGAATGCAGACTGCCTGAACCATGTTTCATCAGGGCCAGTGGGGCTCTCCCTTTCAggttatttattaaacacataGGAAAATTGCACCAGTATTGTCCCTCGTTCTTGTGTTGGGTTTGTTTGTTCGGAATGGGTGGGTAGATTCCAGTGAGTGAACTTGCACCCTTTCAAACCATATCTGGATCAACATTTTGTTAAGGCGTGATTGGTTAACTGTCTATCTGGGTCATAGGCACTGTGCTTTACAGTGTGACCTGGGAACCCCAAGGTTGTGTGTTTCATGTGCAGGATCACAAAAGCACCACAAGAGGGCATTATCTGCATTATTAGGACTATCCCTGAAGTTGAAAAGGGATTTCCCTGCGTAGACCACTGCCTTAAAGACTTGCAGGCATTTTTATAATGGGTGGCAGGGAGCAAACAAGGATGCAAATGTCcccatttattttccactggttGGCTTTTGCAGTCACAATAAGGTATCATGGGGGAAGGGAgttcttaaatgtttaaaatgagcaCTGATTTTAGCAACTGCCCCCGTTTTCTACATGCATGCTGTAGTCCGTGTTAAGAGCAGAGGTGAAGCCAGGAGCCTTGTCCTCTTGTCTTGTTGCTTTAGCCTGCCCCCTGTCCATCTGCGCTGATGCTGGG
>TU17766
CGGCCGGGGCTGGGGGCGGCAGCATGCGTCGCCATCCCACCATCATGCTGGACCTGCAGGTGCGGCGCATCCGGCCGGGGGAGAACCGCGACCGCGATAGCATCGCCAGCCGCACGCGCTCACGGGTGCGCATGGCCGAGAACACGGTGACCTTCGAGAGCGACAGCGGGGGCTTCCGCCGCACCATCTCCCGCTCGGAGCGCGCCGGCATCCGCACCTACGTCAGCACCATCCGCATCCCGCTGCGCCGCATCTCCGAGACCGGGCTGGGAGAGCCGTCCTCCACCGCGCTGCGCTCCATCCTGCGCCAGATCATGACGGGCTTCGGGGAGCTCAGCTCGCTCATGGAGACCGAGGCCGACTCTGAGGCGGCCGCTCCCGGGCTGGAGGGCGGCGGTGGTCCGGCCGTGCAGACCTTCCGCGTCCACGCCAACGACG
>TU17768
GTATCCCAGACAGCAGGGAAGGGAGAACAGGACTCGTCCATATTCCAGCTGAGCTTTCAGCAAGCAGGAGTGGTTTCCGTGGCGATGGACCCTCCCAGCCCAGCGGCAGACCGCGCGGCCGGCGGGCTGGATGAGCGGCGGCGGCAGCAAGAGCGGCTGCACCGTGAGGAGGCATACTACCAGTTCATCAATGGGCTGAGCGAGGACGAGTACCGGCTCATGAGGGACAGCAACCTGCTGGGCACGCCAGGTGAGGTGACCGCGGAGGAGCTGAGGCAGCGACTGGATGGGGCAAAGGAGCGCCTGTCCTCTCAGCCCAGCGTGGATGCCGGCCCACCTGCAGAGGAGGACAGCAGCAATGGAGCCGGTGAGCCAGCTGGGGAGGCCTCGAATGGTGACTCTCTCCTGGAGTGGCTGAACACGTTCCGGCGCACGGGTAATGCCACGCGCAGCGGGCAGAGTGGCAATCAGACGTGGCGTGCGGTGAGCCGCACCAACCCGAACAGCGGTGAGTTCCGCTTCAGCCTGGAGATCAACATCAACCACGAGCAGCCCGAGCCGGCTGAGCTTGACCCGGGTGACGCCCCTCCGGCCTCACTCACcgccccccaccctccaccaCGGGTCACCCAGGGCCGCCGAGCGCAGGCAGCCGCGGCCAGGA

Function

symbol description
rnf6 Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in positive regulation of transcription, DNA-templated; protein ubiquitination; and ubiquitin-dependent protein catabolic process. Predicted to be active in cytoplasm and nucleoplasm. Human ortholog(s) of this gene implicated in esophageal cancer and squamous cell carcinoma. Orthologous to human RNF6 (ring finger protein 6).

NR:

description
PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform X2

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016562 False 2160 mRNA 0.72 3 25010808 25013478
TU17761 True 3282 lncRNA 0.50 1 25007974 25011255
TU17763 False 3100 lncRNA 0.51 1 25008156 25011255
TU17765 False 2608 lncRNA 0.42 1 25008156 25010763
TU17766 False 438 TUCP 0.72 1 25011341 25011778
TU17768 False 664 TUCP 0.39 4 25012364 25015343

Neighbor

gene id symbol gene type direction distance location
AMCG00016564 LOC107584968 coding downstream 6519 24973047 ~ 25001455 (-)
AMCG00016556 NA coding downstream 54341 24930817 ~ 24953633 (-)
AMCG00016555 mtmr6,LOC104951663 coding downstream 113555 24883903 ~ 24894419 (-)
AMCG00016552 NA coding downstream 129747 24875864 ~ 24878227 (-)
AMCG00016551 NA coding downstream 198062 24802736 ~ 24809912 (-)
AMCG00016565 NA coding upstream 41217 25056560 ~ 25057570 (-)
AMCG00016563 usp12,usp12a,LOC107705210,LOC107591222,LOC107584971 coding upstream 57827 25073170 ~ 25080493 (-)
AMCG00016570 NA coding upstream 90989 25106332 ~ 25107565 (-)
AMCG00016569 NA coding upstream 109440 25124783 ~ 25133808 (-)
AMCG00016573 NA coding upstream 199724 25215067 ~ 25218658 (-)
G14311 NA non-coding downstream 101428 24905121 ~ 24906546 (-)
G14245 NA non-coding downstream 227708 24716726 ~ 24780266 (-)
G14222 NA non-coding downstream 323439 24683065 ~ 24684535 (-)
G14218 NA non-coding downstream 389629 24615787 ~ 24618345 (-)
G14214 NA non-coding downstream 401653 24606108 ~ 24606321 (-)
G14400 NA non-coding upstream 106747 25122090 ~ 25122375 (-)
G14472 NA non-coding upstream 389552 25404895 ~ 25405101 (-)
G14487 rpl19,LOC101068736,LOC103368168 non-coding upstream 501646 25516989 ~ 25520096 (-)
G14496 NA non-coding upstream 527703 25543046 ~ 25545725 (-)
G14507 NA non-coding upstream 589437 25604780 ~ 25609059 (-)
G14305 NA other downstream 125876 24881148 ~ 24882098 (-)
AMCG00016538 smpx,LOC107721880,LOC107590224,LOC107663668,LOC107705278 other downstream 441018 24553692 ~ 24566956 (-)
AMCG00016531 NA other downstream 684516 24309256 ~ 24323458 (-)
AMCG00016505 NA other downstream 1122716 23864581 ~ 23885258 (-)
AMCG00016504 NA other downstream 1145235 23841062 ~ 23862739 (-)
G14392 NA other upstream 65225 25080568 ~ 25083699 (-)
AMCG00016579 NA other upstream 249429 25264772 ~ 25277478 (-)
AMCG00016591 NA other upstream 397973 25413316 ~ 25420371 (-)
G14534 NA other upstream 737652 25752995 ~ 25754472 (-)
G14637 NA other upstream 1066160 26081503 ~ 26083167 (-)

Expression


Co-expression Network