AMCG00016568


Basic Information

Item Value
gene id AMCG00016568
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25103687 ~ 25106170 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016568
ATGGAGGCTGACGGCGAGCGCAGCGGCACCTGGGCAGTCACGAACAGCTTTGTAATCCCTTTATCCGCGATCGCCATGGGAGAGGCCTTCAAGAGCCCGGGCAAAAGCTTCATCTGCTCGTTCCCTGAATGCGACGCCTCCTTTAACAAGTCCTGGAAGCTGGAAGCGCACCTGTGCAAGCACACGGGGGTGAAGCCGTTCGTGTGCACTCAGGACGGCTGTGACAAGCGCTTCACTCGGAGCTTCCACCTGACCCGCCACCAGCTGAGCCACAGCGGCGAGAAGCCCGTGCGgtgCACGGTGGACGGCTGTGACGCTGCATTCACCACCACCTCCAACCTGAAGAAACACATGGCCCGCAAGCATGAGCGCCAGGAGAAGCAATACACTTGCGAGTACGAGGGCTGTGGAAAATCCTTCAAGAAGAACAGTCGGCTCAAAATCCACCAGTATGAGCACACCAACCTGCTGCCGTTTAAGTGTAACCACGAGGGCTGTGAGAAGAGCTTCCCCGTCCCTAGCAAGCTGAAACGGCACGAGAAGGTCCACATGGGTTATCCTTGCAAAGAGGAAGGCTGTCCGTTCCTGGGAAAAACCTGGACCGAGTTCATGAAGCACAAGAGAACCCAGCACATCGAGCTGCTGCAGTGTGATCAGTGCAGTCGGTCCTTCAAGAGCGCCTGGTTCCTGCAGCAGCACCAGTACGTGCACCAGGCTGAGAGGGCCGTGCTACGCTGCCCCCACCAGGGCTGCCCCCGCACCTACACCACCGCCTTCAACCTGCAGAGCCACATACTGTCCTTCCATGAGGAGCAGCGGCCCCACGCCTGCCCCCACCCTGGCTGTGGAAAAACCTTTGCCATGAGGCAAAGTCTGCAGCGCCACGGTGTCGTGCATgatcctgaaaagaaaaaactgaaggTAAGATCACAAAACCCCTCTCCCAGTGTGCTGTGGCTGAACATCCTCTCCCAGTGGGGCAGCAACTGTGCAGCCCTTGGTCTGGCCTCCAAGCTGAGCGGCTACAAGGCGTCCAAGAAAGCGAGTGCCCCGGAGCCAGCCTCGCTGGCCACCCTGCTGCAGAGCACCACCCTGGAGCAGCAGCCATCCACCCCTGCCCCACCACCCCCTGAGCCACAGTGA

Function

GO: NA

KEGG:

id description
K09191 GTF3A; general transcription factor IIIA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016568 True 1143 mRNA 0.60 9 25103687 25106170

Neighbor

gene id symbol gene type direction distance location
AMCG00016560 NA coding upstream 14750 25087611 ~ 25088937 (+)
AMCG00016557 NA coding upstream 54135 25034938 ~ 25049552 (+)
AMCG00016559 cdk8 coding upstream 72634 25020845 ~ 25031053 (+)
AMCG00016561 NA coding upstream 83466 25016040 ~ 25020221 (+)
AMCG00016553 NA coding upstream 183651 24912011 ~ 24920036 (+)
AMCG00016567 gsx1,LOC106603173,LOC106563638,LOC107560336,LOC107719766 coding downstream 76061 25182231 ~ 25183232 (+)
AMCG00016576 NA coding downstream 93972 25200142 ~ 25200540 (+)
AMCG00016571 pan3 coding downstream 135844 25242014 ~ 25262456 (+)
AMCG00016585 NA coding downstream 301057 25407227 ~ 25408906 (+)
AMCG00016588 rpl19,LOC107084780 coding downstream 409309 25515479 ~ 25520165 (+)
G14177 NA non-coding upstream 684080 24419358 ~ 24419607 (+)
G14127 eif1ax,EIF1AX,eif1axb,LOC105905255,LOC106563585,LOC106590461,LOC108411992 non-coding upstream 727860 24370326 ~ 24375827 (+)
G14136 NA non-coding upstream 764839 24336970 ~ 24338848 (+)
G14132 NA non-coding upstream 782368 24317800 ~ 24321319 (+)
G13979 lipt2 non-coding upstream 1237887 23862215 ~ 23865800 (+)
G14354 NA non-coding downstream 15913 25122083 ~ 25122392 (+)
G14363 NA non-coding downstream 38412 25144582 ~ 25144782 (+)
G14383 NA non-coding downstream 163668 25269838 ~ 25270195 (+)
G14444 NA non-coding downstream 251717 25357887 ~ 25359035 (+)
G14445 NA non-coding downstream 254301 25360471 ~ 25360808 (+)
AMCG00016558 rpl21,LOC107591224 other upstream 18590 25080674 ~ 25085097 (+)
G14326 NA other upstream 93000 25007962 ~ 25010687 (+)
AMCG00016537 NA other upstream 541880 24479706 ~ 24561807 (+)
G14057 NA other upstream 993505 24080017 ~ 24110182 (+)
AMCG00016506 NA other upstream 1158663 23938051 ~ 23945024 (+)
G14361 NA other downstream 27028 25133198 ~ 25133879 (+)
AMCG00016566 NA other downstream 44178 25150348 ~ 25157461 (+)
AMCG00016584 NA other downstream 264126 25370296 ~ 25404840 (+)
AMCG00016598 NA other downstream 619083 25725253 ~ 25758926 (+)
AMCG00016607 NA other downstream 834358 25940528 ~ 25950176 (+)

Expression


Co-expression Network