AMCG00016573


Basic Information

Item Value
gene id AMCG00016573
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25215067 ~ 25218658 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016573
ATGTACGTGAGCTATCTTTTGGATAAAGAGGTGAGCATGTACCCCGGTTCTGTCAGACACTCTGGACTCAATCTTGGTGCTCAACACTTCGTCAGCCCGCCACAGTACCCGGATTATGGGCACTACCATCACGTCCCGGTGCTGAGTGGGGAAGGGGACCCCCGGGACCCCCAGCCCACACCCTCCTGGCACTACGGAACCACCCGTGAAGACTGGAGCGCTTACCCACAGATACCCCCGGGTGGGGCCCACCATCTGAGCGCCTCTCCTGGGACTGTCTGCTACAGCCCGAGCGAGTACAGCCCTGGCCCCTTGCCCCCGCTGCCCACCCAGGGTGTGATTCAGCCCCTGGGGTGCCACCCGGCGGAGCACACCGATTCCGGCAGCCAGAGGATTTACGAATGGACACGGAGGAGCGCACAGCCCGCCGCCAACACCTCGGCCCACAGCCCGACAGCCTCACGGTCTACCTTACACAACACTGAGGTGAAAATCTGGTTCCAGAACAGAAGAGCCAAGGAAAGAAAACTGGACAAGAAGAAGCAGCAGCCTCAGCCCCAGCCCGGCCCAGTCCAGAGCGCTCCACAGGGGCTCAGTCCGGTGGTACTGGGATCTGCCTCCCTGGTCCCGGGCGGTGGGGATCCTGTCCTCGACCGCGCTCAGCGCTACTGCCCCCCGGAGCCGCCCCACAGCGAGGGCATCCTGGCAGGGCTCTGA

Function

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0048513 animal organ development biological_process
GO:0009888 tissue development biological_process
GO:0009653 anatomical structure morphogenesis biological_process
GO:0043565 sequence-specific DNA binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016573 True 717 mRNA 0.64 3 25215067 25218658

Neighbor

gene id symbol gene type direction distance location
AMCG00016569 NA coding downstream 81259 25124783 ~ 25133808 (-)
AMCG00016570 NA coding downstream 107502 25106332 ~ 25107565 (-)
AMCG00016563 usp12,usp12a,LOC107705210,LOC107591222,LOC107584971 coding downstream 134574 25073170 ~ 25080493 (-)
AMCG00016565 NA coding downstream 157497 25056560 ~ 25057570 (-)
AMCG00016564 LOC107584968 coding downstream 213612 24973047 ~ 25001455 (-)
AMCG00016572 NA coding upstream 1646 25220304 ~ 25221568 (-)
AMCG00016574 NA coding upstream 5407 25224065 ~ 25234275 (-)
AMCG00016575 NA coding upstream 16334 25234992 ~ 25237511 (-)
AMCG00016583 NA coding upstream 60997 25279655 ~ 25282226 (-)
AMCG00016581 NA coding upstream 63576 25282234 ~ 25284427 (-)
G14400 NA non-coding downstream 92692 25122090 ~ 25122375 (-)
G14311 NA non-coding downstream 308521 24905121 ~ 24906546 (-)
G14245 NA non-coding downstream 434801 24716726 ~ 24780266 (-)
G14222 NA non-coding downstream 530532 24683065 ~ 24684535 (-)
G14218 NA non-coding downstream 596722 24615787 ~ 24618345 (-)
G14472 NA non-coding upstream 186237 25404895 ~ 25405101 (-)
G14487 rpl19,LOC101068736,LOC103368168 non-coding upstream 298331 25516989 ~ 25520096 (-)
G14496 NA non-coding upstream 324388 25543046 ~ 25545725 (-)
G14507 NA non-coding upstream 386122 25604780 ~ 25609059 (-)
G14517 NA non-coding upstream 453646 25672304 ~ 25675200 (-)
G14392 NA other downstream 131368 25080568 ~ 25083699 (-)
AMCG00016562 rnf6 other downstream 199724 25007974 ~ 25015343 (-)
G14305 NA other downstream 332969 24881148 ~ 24882098 (-)
AMCG00016538 smpx,LOC107721880,LOC107590224,LOC107663668,LOC107705278 other downstream 648111 24553692 ~ 24566956 (-)
AMCG00016531 NA other downstream 891609 24309256 ~ 24323458 (-)
AMCG00016579 NA other upstream 46114 25264772 ~ 25277478 (-)
AMCG00016591 NA other upstream 194658 25413316 ~ 25420371 (-)
G14534 NA other upstream 534337 25752995 ~ 25754472 (-)
G14637 NA other upstream 862845 26081503 ~ 26083167 (-)
AMCG00016617 NA other upstream 928852 26147510 ~ 26149543 (-)

Expression


Co-expression Network