AMCG00016574


Basic Information

Item Value
gene id AMCG00016574
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25224065 ~ 25234275 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016574
CAAGACCAATGCCACCTCAAGTAAGCTTAGTATTGCCTAGGAGGGAAGGATATGCCTATGAGTTTCAAGCCAGCTCTGAAGGGTACCCTGCACCAACTATTAGATGGTTTACATGTCTGTCTCGAGATAGCTGTCAAGCTGCACAGAGAAAACAGCAAACTGAAGAGGGGAATGGACTTGTGCGTGtgtttaatacaatttcaagtTATGATTTTAAAGATCAACATATTCTGTGCTGCGCAGAAAACATTGTAGGTGAAGAATGCACCAGAGTCTACGATTATGAAGATGGATTTATACACGTATTacacatgaaaaaacacataGTTATCCGGAAAAATGAAAAGTTTTGCTTGGAAGTTGTACTGTCGGCTTACCCAGAAGTCACATGCAAATGGATCTTCCAAACCACAGCTGTTCCGTGCAAAGAGTCAAACCTATTCAAAGGAAACAGGACTTTTAAGTACTGTGATCACATGAATACCCCAGGCCAGTACACGTTTTATGCGGAAAATGCTGATGTCAACATAAGCAGgattctgtctgtttgtgtggaAGAGTTGGCCCAGCCGAACTTGATCCAAAACGGAGACGTGTACAACTGCACTACCCAGGGCTACCCAGCACCTGCCCTCACCTGGTTGATGTGCCCCTCCAATGCCAACTGTTCAGACCCAGACTCCCTGAAGCCGGTACAGGCAGCATTGACCTCGGGACAATTAGATGCAGAGGTGTTCTGTCACAAGAGAGTGTCCAGCTCCCTGGACCTGCAGAAAGTGCCGAGCGACCACAGGATCCAGTGCTGCGCTCACAACTCCGGCAGCTCGTCCTGCACTGCGTTCATAACCCCGACCCCACCCTCTTCACAACATGTCACCCTGCTCCATGTGCTCTATGTCCTGCTGGGCATCGCCATCGTCCTGATCCTGCTGTCAATCTGCCTGTACAACAGAAAGaaaccaAAGTACGAAAGCCAGCTGCAAATGCTGCAGCCCATGGGGTTCCCTGACAATGACTATATCTACATCGATTTCCGCAACTTTGAGTATGATCAGAAATGGGAATTTCCAAGAGAGAATCTGGAACTCGgaCCGATTTACCTGATTTTTCAGTACTGCTGCAACGGGGACCTTCTCAACTACCTGAGGAACAACAGGGAGAACTTTCACAAGTCGCTGACCGACGTCTTCACCAAGAACCGCTACAGCTGCTTGTACCATAATTTCCAGCATGAGTCGATTTTCACGCAGGAGTCTGGGACCCATGTGGTGATGGAGGCGGAGCGATACCCCCTGGAGCGGCAGGACGAAGCAGACAGACTGCTCAGCTGCAGCGACTCGGTGGGGGGGCCCTGTGAGGTGATGAAGTCCTGCTGGACCCTGGAGCCAATGAAGAGACCAGCGTTCTCCAAGATCGTTTTGTTCATGGAGGGTCAGCTGACCAAGGCCGAGGAGGAGCTCTATCAAATCATGGATAGAGCAGTTCTGACCAGCAGCGATTACAGAAATCTGCCCACCCACCTCTACAAAGAGGAACCAGGAGGGTCTGACGCAGGGGCACCCACAGACGACCACCCCGGCGACCAGCCCAGAGCGGAGTGAGGCCCGAGCACCCAGCGCTTCTCTGGCCCCTCCTCCGGACGGCAGAGCCCGAGCAGAGGCAGTATTTACCTTTCCACTGCACCTCTCCGGCTCTCGTGCTTCGATTCTGCTCGCCTCACAGCCGCAGCTGCAGATGAGCGCTAAGCCAGGCCTCGACGGCACCACTCAGGGGCACAGCTGCACCTCTGACTGGGGGAATTCAATGAGGTGGCTGAGGCCGATTCAGGCCTCTCTGGACAAAAGGGAAAGTGGCTTAAATTCAGTGGCTGCTCTGCTCTCAGACCTCTGCCAGGGGACAGCTTTAATGCTTCAGACTCATGGGATATTTCTATTGTTGTGACcaaatttattgtatttctcttttcttaGATTATGCTGGGTCTCATAAATATATAGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016574 True 1999 mRNA 0.51 12 25224065 25234275

Neighbor

gene id symbol gene type direction distance location
AMCG00016572 NA coding downstream 2497 25220304 ~ 25221568 (-)
AMCG00016573 NA coding downstream 5407 25215067 ~ 25218658 (-)
AMCG00016569 NA coding downstream 90257 25124783 ~ 25133808 (-)
AMCG00016570 NA coding downstream 116500 25106332 ~ 25107565 (-)
AMCG00016563 usp12,usp12a,LOC107705210,LOC107591222,LOC107584971 coding downstream 143572 25073170 ~ 25080493 (-)
AMCG00016575 NA coding upstream 717 25234992 ~ 25237511 (-)
AMCG00016583 NA coding upstream 45380 25279655 ~ 25282226 (-)
AMCG00016581 NA coding upstream 47959 25282234 ~ 25284427 (-)
AMCG00016578 NA coding upstream 50854 25285129 ~ 25311138 (-)
AMCG00016580 NA coding upstream 84623 25318898 ~ 25325470 (-)
G14400 NA non-coding downstream 101690 25122090 ~ 25122375 (-)
G14311 NA non-coding downstream 317519 24905121 ~ 24906546 (-)
G14245 NA non-coding downstream 443799 24716726 ~ 24780266 (-)
G14222 NA non-coding downstream 539530 24683065 ~ 24684535 (-)
G14218 NA non-coding downstream 605720 24615787 ~ 24618345 (-)
G14472 NA non-coding upstream 170620 25404895 ~ 25405101 (-)
G14487 rpl19,LOC101068736,LOC103368168 non-coding upstream 282714 25516989 ~ 25520096 (-)
G14496 NA non-coding upstream 308771 25543046 ~ 25545725 (-)
G14507 NA non-coding upstream 370505 25604780 ~ 25609059 (-)
G14517 NA non-coding upstream 438029 25672304 ~ 25675200 (-)
G14392 NA other downstream 140366 25080568 ~ 25083699 (-)
AMCG00016562 rnf6 other downstream 208722 25007974 ~ 25015343 (-)
G14305 NA other downstream 341967 24881148 ~ 24882098 (-)
AMCG00016538 smpx,LOC107721880,LOC107590224,LOC107663668,LOC107705278 other downstream 657109 24553692 ~ 24566956 (-)
AMCG00016531 NA other downstream 900607 24309256 ~ 24323458 (-)
AMCG00016579 NA other upstream 30497 25264772 ~ 25277478 (-)
AMCG00016591 NA other upstream 179041 25413316 ~ 25420371 (-)
G14534 NA other upstream 518720 25752995 ~ 25754472 (-)
G14637 NA other upstream 847228 26081503 ~ 26083167 (-)
AMCG00016617 NA other upstream 913235 26147510 ~ 26149543 (-)

Expression


Co-expression Network