AMCG00016579


Basic Information

Item Value
gene id AMCG00016579
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25264772 ~ 25277478 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016579
ATGGTGATAGTGGAGTTCTGCAAGTATGGTAACCTCTCCAACTACCTGAAGAGCAAGAGAGACGTGTTCCTCCTGCACAAGGACTCCAGCGGCCAAGCACAGCAGGACAGCGGGGGCGGCTCCACGGGGGCAGCGGAGGTGGGGGCGGCGGAGGTGGGAGCAGCAGCGGAGGCGCGGGGGGAGGAGAAGGAGCGTCTGGACAGCGTGTCCAGCACTCACAGCTCTGCCAGCTCCGGCTTCGAGGACGAGAAGAGCCTACATGACACAGCAGAGGAACAGGAGGATTCAGATGCTTTCTACAACAAACCCATAGTGATGGAGGATCTGATCTCCTACAGCTTCCAGGTGGCTCGAGGGATGGAGTTTCTGGCATCGCGGAAGATAGACGAGGATTTCTGCAGCAGACTGAAGGAAGGCACGAGGATGCGGGCTCCCGAGTACGCCACTGCAGACATATACAACACCATGCTGGCCTGCTGGGAGGCCGAGCCCCGGGAGCGGCCCACCTTCCCACAGCTGgaCGGGAAGGATTACATCCCCCTGAACACTGTCCTGTCCCCGAGCAGCGCTGCCCCATCCTCGGGGGAGGGAACTGCAGCAGGCGAGCTGCTGGGACCCCGGCTCAGTTTCCACAGCGCTGGCAGTCTGGGGAACATCAACACCAAGCGATCTCAGAGTGTGAAGACATTTGAGGAAATCTCTGTGAGCGACGGGAAAGTCTGGGAGGATTACCAGTCCGACAGTGGGATGGTGCTGCCGTCCGAGGAGCTGCAGAGCCTGAGGTGGAGCGCAGGTCGTACCCGTCCCGCCTCGCCCAGTCCAGGAGAGGAGGAGCCCCCCATGTTCTCCTGCATCAGCAACACCCAGGAGCCGTGCTGCTCGCCCCCGCCGGACTACAACTCCGCCGTCTTCTACCCCCCCCTATAA
>TU17858
CATCACTAAGAAAAATATTGTATCTGAGTATCTGCTCAGAGTCGGTCAAAGCAAGAGAATTTAGTTTCTACATGAGCCAATGTGTTCAACTTCTCCCTTCCCTGACCACATCAATGCTGCTGCTTTCCAATAGAGGGCGCCACTGGCAGCGAGCACAAGGCTTTGATGACAGAGCTCAAAATCCTCATCCACATTGGACAACACCTCAATGTCGTCAACCTGCTGGGCGCCTGCACCAAATACGGAGGTCCCCTAATGGTGATAGTGGAGTTCTGCAAGTATGGTAACCTCTCCAACTACCTGAAGAGCAAGAGAGACGTGTTCCTCCTGCACAAGGACTCCAGCGGCCAAGCACAGCAGGACAGCGGGGGCGGCTCCACGGGGGCAGCGGAGGTGGGGGCGGCGGAGGTGGGAGCAGCAGCGGAGGCGCGGGGGGAGGAGAAGGAGCGTCTGGACAGCGTGTCCAGCACTCACAGCTCTGCCAGCTCCGGCTTCGAGGACGAGAAGAGCCTACATGACACAGCAGAGGAACAGGAGGATTCAGATGCTTTCTACAACAAACCCATAGTGATGGAGGATCTGATCTCCTACAGCTTCCAGGTGGCTCGAGGGATGGAGTTTCTGGCATCGCGGAAGGGTCTGAGGAACTCGCGCAGACTTCCTGTTCACCTCAGCCCACTTCCCCCTGCGAAGCGCACAATGAGGGGGTTTTCTTTCACACCGCAGAATAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016579 True 927 mRNA 0.61 9 25264772 25276861
TU17858 False 733 TUCP 0.44 5 25273664 25277478

Neighbor

gene id symbol gene type direction distance location
AMCG00016575 NA coding downstream 27261 25234992 ~ 25237511 (-)
AMCG00016574 NA coding downstream 30497 25224065 ~ 25234275 (-)
AMCG00016572 NA coding downstream 43204 25220304 ~ 25221568 (-)
AMCG00016573 NA coding downstream 46114 25215067 ~ 25218658 (-)
AMCG00016569 NA coding downstream 130964 25124783 ~ 25133808 (-)
AMCG00016583 NA coding upstream 2177 25279655 ~ 25282226 (-)
AMCG00016581 NA coding upstream 4756 25282234 ~ 25284427 (-)
AMCG00016578 NA coding upstream 7651 25285129 ~ 25311138 (-)
AMCG00016580 NA coding upstream 41420 25318898 ~ 25325470 (-)
AMCG00016577 NA coding upstream 49390 25326868 ~ 25347437 (-)
G14400 NA non-coding downstream 142397 25122090 ~ 25122375 (-)
G14311 NA non-coding downstream 358226 24905121 ~ 24906546 (-)
G14245 NA non-coding downstream 484506 24716726 ~ 24780266 (-)
G14222 NA non-coding downstream 580237 24683065 ~ 24684535 (-)
G14218 NA non-coding downstream 646427 24615787 ~ 24618345 (-)
G14472 NA non-coding upstream 127417 25404895 ~ 25405101 (-)
G14487 rpl19,LOC101068736,LOC103368168 non-coding upstream 239511 25516989 ~ 25520096 (-)
G14496 NA non-coding upstream 265568 25543046 ~ 25545725 (-)
G14507 NA non-coding upstream 327302 25604780 ~ 25609059 (-)
G14517 NA non-coding upstream 394826 25672304 ~ 25675200 (-)
G14392 NA other downstream 181073 25080568 ~ 25083699 (-)
AMCG00016562 rnf6 other downstream 249429 25007974 ~ 25015343 (-)
G14305 NA other downstream 382674 24881148 ~ 24882098 (-)
AMCG00016538 smpx,LOC107721880,LOC107590224,LOC107663668,LOC107705278 other downstream 697816 24553692 ~ 24566956 (-)
AMCG00016531 NA other downstream 941314 24309256 ~ 24323458 (-)
AMCG00016591 NA other upstream 135838 25413316 ~ 25420371 (-)
G14534 NA other upstream 475517 25752995 ~ 25754472 (-)
G14637 NA other upstream 804025 26081503 ~ 26083167 (-)
AMCG00016617 NA other upstream 870032 26147510 ~ 26149543 (-)
AMCG00016616 sp6,LOC102212756,LOC101463567,LOC100707362,LOC107396441,LOC106564946,LOC103384358 other upstream 879043 26156521 ~ 26159922 (-)

Expression


Co-expression Network