AMCG00016580


Basic Information

Item Value
gene id AMCG00016580
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25318898 ~ 25325470 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016580
ATGGGAGACCAGCCGAAATCGGGCGGTGCGCACGGGCGGACAGCGCTCACACACACGGGGGAGGCAACACTGCAGGACCCCGCTGTGCCTAGAACCCCACTCTGGCCGGCAGTTCTGCAGGTGTTGGCCTGGGACCCTCCCACTGCTGAGAAGAGTCTGGGCCTGGGGATGACTGCCGCACCCCCCTCCGACCCACGAGCCACAGCTTCACACCCAGGGCCTGAGCGCAATTTCCCTGCCCTGTGGGTTAGCCTGACTGCCTGTCTCGCTGTGCTGGTGCTTGGAGGCAGTGCTGCCATCACCTGGTACCTCCTGACTGAACTCCCAGCAGAGCAGATGTATTTTGGCGGCTCACTGCGCTTCATCAATGCTGCCTATAGTTTAGCACTGGCTGATAGGTCGTCCAGCAACTTCCAGCTCTTGGCAAGAGCACTTCAGCAGCTAATAGGCAATGCCCTCCTCCAGCCTGAGCAGCAGTGGCACTGTATCTGTGTGAATGTGACAGCCTTCAGtgAGGGCAGTGTCATTGCCcatttcctcctctctctggaGGTCAACAGCCGAGTGGACCAGACCTTACATGGGTCGGATTTTGCACAGCAACTGACCAATCACATCAAGTCAAGTCATGAGGAGTATTTGCTGTCCTCACTAAAAGGTGAGCATCTGGAAGTGTCCCAGGGTTTAGACTGTCCGGTATCTGGGCTGGAACTCCACTGGAGGGGTGCGGCTCCGTGCCGGTGGGAGCTCAGGGCAGGGCGGGGCCAGCGCGTCAGACTGACCCTCCACAGCCAGAGCTCAGGGGGAGACTGTGAGCAGGACTTCATCGCTGTGTATGACTCTTTAGCCGCAGGGAAAGCACGGCTCATCACCAGGCTGTGCCCCGGGTCTGAGCACCGCCCTCTGCAGGCGCGAAGTGTGCTCTCCTCCAGCCGTGTCATGCTGGTGATCCTCCATTCACAGCAGCAGCCCTCCGCTGGGCTGTGGGCATCCGCACACTTCCTGCAGGGCAACAGGGAGACCTGCGCATTTCCTGCCTTCCAGTGTCATAACACAACATGCATCGAGAAGCCCAGCGAAGAGTGTGACAGCACTGTGGACTGTCCAGACACCCCTGAGGAGATGGCCTGCGGCTGCGGGCGGCGGGGGGAGCAGGAGAGCCGTGTGGTAGGGGGACAGGATGCCCAGCACGGGGAGTGGCCCTGGCAGGCCAGTCTACACTTCCTGCAAAAACATGTTTGCGGGGCGACAATCATTGGGCCGCGATGGCTGCTGTCTGCTGCACACTGCTTCCAGGACCCCACACAGCGCAGGGTATCCAGTGCATGGCTGTGGACAGCGGTGGTGGGCACAGTCAGCAGACAGGCCGGTGGCCCAGGCTCCGTCTTGCATGTGGTCCGGCGCATTATAACCCATGAGCAGTACAACATGGAGACGCTGGACTCTGACCTGGCCCTGCTGGAGTTGGAGAGGCCGCTGGAGTTCAGCAGCAGTGTGCAGCCCGTGTGTCTGCCTCCCCGCTCACACAGCATCCCTGCAGGCCAGCCCTGCTTCGTCACTGGCTGGGGTCTGCTGCAGGAAGATGGTGTGCTGCCCCTAGTGCTGCAGAAGGGGCAGGTGCAAGTGATCGCGCAGGCTGAGTGCTCCAGGTACCTGGGCGGCTCCGTGACGGTGAATATGCTCTGTGCAGGACAGCTGCAGGGGGGCGTGGATGCCTGCCAGGGTGACTCTGGGGGACCCCTGGTGTGCCAGGCGAGGTCAGGGCGCTGGGTCCAGGCCGGCGTGGTGAGCTGGGGGGAGGGCTGCGCTCGCAGGCAGCGGCCCGGCGTCTACACCCGCCTCTCGCAGTTCCAGGACTGGATCAGCCAGCAGGTCGGCGTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016580 True 1884 mRNA 0.62 13 25318898 25325470

Neighbor

gene id symbol gene type direction distance location
AMCG00016578 NA coding downstream 7760 25285129 ~ 25311138 (-)
AMCG00016581 NA coding downstream 34471 25282234 ~ 25284427 (-)
AMCG00016583 NA coding downstream 36672 25279655 ~ 25282226 (-)
AMCG00016575 NA coding downstream 81387 25234992 ~ 25237511 (-)
AMCG00016574 NA coding downstream 84623 25224065 ~ 25234275 (-)
AMCG00016577 NA coding upstream 1398 25326868 ~ 25347437 (-)
AMCG00016582 NA coding upstream 21975 25347445 ~ 25349142 (-)
AMCG00016593 tagln3b,tagln3,LOC107701685,LOC107705223 coding upstream 27871 25353341 ~ 25357447 (-)
AMCG00016589 NA coding upstream 32417 25357887 ~ 25360682 (-)
AMCG00016592 abhd10,LOC106590440 coding upstream 37928 25363398 ~ 25367579 (-)
G14400 NA non-coding downstream 196523 25122090 ~ 25122375 (-)
G14311 NA non-coding downstream 412352 24905121 ~ 24906546 (-)
G14245 NA non-coding downstream 538632 24716726 ~ 24780266 (-)
G14222 NA non-coding downstream 634363 24683065 ~ 24684535 (-)
G14218 NA non-coding downstream 700553 24615787 ~ 24618345 (-)
G14472 NA non-coding upstream 79425 25404895 ~ 25405101 (-)
G14487 rpl19,LOC101068736,LOC103368168 non-coding upstream 191519 25516989 ~ 25520096 (-)
G14496 NA non-coding upstream 217576 25543046 ~ 25545725 (-)
G14507 NA non-coding upstream 279310 25604780 ~ 25609059 (-)
G14517 NA non-coding upstream 346834 25672304 ~ 25675200 (-)
AMCG00016579 NA other downstream 41420 25264772 ~ 25277478 (-)
G14392 NA other downstream 235199 25080568 ~ 25083699 (-)
AMCG00016562 rnf6 other downstream 303555 25007974 ~ 25015343 (-)
G14305 NA other downstream 436800 24881148 ~ 24882098 (-)
AMCG00016538 smpx,LOC107721880,LOC107590224,LOC107663668,LOC107705278 other downstream 751942 24553692 ~ 24566956 (-)
AMCG00016591 NA other upstream 87846 25413316 ~ 25420371 (-)
G14534 NA other upstream 427525 25752995 ~ 25754472 (-)
G14637 NA other upstream 756033 26081503 ~ 26083167 (-)
AMCG00016617 NA other upstream 822040 26147510 ~ 26149543 (-)
AMCG00016616 sp6,LOC102212756,LOC101463567,LOC100707362,LOC107396441,LOC106564946,LOC103384358 other upstream 831051 26156521 ~ 26159922 (-)

Expression


Co-expression Network