AMCG00016582


Basic Information

Item Value
gene id AMCG00016582
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25347445 ~ 25349142 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016582
atgtatgccCTCACGCAGAGTGCCTTGAGCAAGAGCCTGGATACCGACCTGACCTCTGATGACAGTAATGCTCTCTTCCAGGGCACTATAGGGTTACAGGTACCTCCTGCTTTAGAAACCGATACTCCACTGACAACAGCTCAGAAAACACCCCGGCAAACGTCGTGCTCGGCCGGTGCGATGGGATTATGTCTGGCTTGTGTACGGCTCCTCTTCCCCCCGCCTAAAGCGACCTACCGATACCCTGCAGCGAGGCAGCGGCGCCCCAGGATGGGCACGGAAACCGAGGGGCACAGCCCGAGCCCCGCTGGGGACAATGCCAGTGTCAGTATCAGCACCATCGGGGACAATGTGACCGACGTGTCTGTGGAAGTGGCGACCGTGGATGCCAAGCTGTCAAAGGCCAGAGCACGGCGGAAGCACAGAAATGGGAAGAGGAAAGGGAAGAGGAGGCGCCGGTCGAAGAAGCGGAAGACCGTGTGGAACCTGCAGGCACTGGCCATCCTGCTGACCGTCACCGTGTTTGTGGTCGTGGTGATCATGTGGACCCTGCTATGGCTGTTCATCTGTGAGCGAGGGAgcaagggaggagggagggagagggagagcaggggaCAGGGAGCATGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016582 True 630 mRNA 0.60 2 25347445 25349142

Neighbor

gene id symbol gene type direction distance location
AMCG00016577 NA coding downstream 8 25326868 ~ 25347437 (-)
AMCG00016580 NA coding downstream 21975 25318898 ~ 25325470 (-)
AMCG00016578 NA coding downstream 36307 25285129 ~ 25311138 (-)
AMCG00016581 NA coding downstream 63018 25282234 ~ 25284427 (-)
AMCG00016583 NA coding downstream 65219 25279655 ~ 25282226 (-)
AMCG00016593 tagln3b,tagln3,LOC107701685,LOC107705223 coding upstream 4199 25353341 ~ 25357447 (-)
AMCG00016589 NA coding upstream 8745 25357887 ~ 25360682 (-)
AMCG00016592 abhd10,LOC106590440 coding upstream 14256 25363398 ~ 25367579 (-)
AMCG00016590 NA coding upstream 72141 25421283 ~ 25423659 (-)
AMCG00016595 LOC106600984,LOC106607252,LOC107754318,LOC105013306,LOC107670909,LOC107745936,LOC107567387 coding upstream 84692 25433834 ~ 25438775 (-)
G14400 NA non-coding downstream 225070 25122090 ~ 25122375 (-)
G14311 NA non-coding downstream 440899 24905121 ~ 24906546 (-)
G14245 NA non-coding downstream 567179 24716726 ~ 24780266 (-)
G14222 NA non-coding downstream 662910 24683065 ~ 24684535 (-)
G14218 NA non-coding downstream 729100 24615787 ~ 24618345 (-)
G14472 NA non-coding upstream 55753 25404895 ~ 25405101 (-)
G14487 rpl19,LOC101068736,LOC103368168 non-coding upstream 167847 25516989 ~ 25520096 (-)
G14496 NA non-coding upstream 193904 25543046 ~ 25545725 (-)
G14507 NA non-coding upstream 255638 25604780 ~ 25609059 (-)
G14517 NA non-coding upstream 323162 25672304 ~ 25675200 (-)
AMCG00016579 NA other downstream 69967 25264772 ~ 25277478 (-)
G14392 NA other downstream 263746 25080568 ~ 25083699 (-)
AMCG00016562 rnf6 other downstream 332102 25007974 ~ 25015343 (-)
G14305 NA other downstream 465347 24881148 ~ 24882098 (-)
AMCG00016538 smpx,LOC107721880,LOC107590224,LOC107663668,LOC107705278 other downstream 780489 24553692 ~ 24566956 (-)
AMCG00016591 NA other upstream 64174 25413316 ~ 25420371 (-)
G14534 NA other upstream 403853 25752995 ~ 25754472 (-)
G14637 NA other upstream 732361 26081503 ~ 26083167 (-)
AMCG00016617 NA other upstream 798368 26147510 ~ 26149543 (-)
AMCG00016616 sp6,LOC102212756,LOC101463567,LOC100707362,LOC107396441,LOC106564946,LOC103384358 other upstream 807379 26156521 ~ 26159922 (-)

Expression


Co-expression Network