AMCG00016585


Basic Information

Item Value
gene id AMCG00016585
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25407227 ~ 25408906 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016585
ATGGAGTTAATGCCAATATACAGAGTGACCGTTTCCCTTGTCCTGCTGGCGGCTCTGGCCAAAGCAGAGGATTTGCACAGAAGGGACAGCTGTCCATCTGGCTACCCTGGGATTCCTGGAGAGCCTGGACACAACGGGGTCCCAGGCAGAGATGGGCGGGATGGTTCTAAGGGTGACAAGGGAGATCAAGGTGAGTTGGGGACCTGTGGCGCAGCAGGAAAGGACGGGCCAAAGGGAGATAAAGGAGAATCAGGCACTGCAGGCACTGCTGGCGTGAAGGGCAGACGAGGGGAGACAGGCGACAGGGGCTTTCCTGGGAAAATGGGGCCTCAGGGCATTGCAGGGCCTCCTGGAGCGAAAGGACAGAAAGGCGAGTTGGGGCTGCCTGGGCCGCAGGGACACAAGGGCGACGTGGGGCCACAGGGGCTCAAGGGGCAACAGGGCCTGTTAGGTCCTCAAGGAGAAAGAGGCTTTTCTGGCCCCAGGGGACCCACGGGGCTAACTGGCCCAATGGGTCAGATTGGCCCACCAGGTACGAAGGGCAGCATCGGATACAGAGGTGAGACAGGGCAGAAGGGAGATGCGGGAGAGAAGGGTGAAAAAGGCAACATGCCGGAGATTCCAAGGAGTGCCTTCTCTGTGGGATTGACAGAGGCCACCAAGCTGCCCCCCATCAACACACCCATTCGCTTCGACAAAATCATCTACAACCAGCAGAGCCACTATGACCCTCTGACAGGCAGGTTCACATGTGCATTTACAGGAGCGTATTACTTCACCTACCACATCACAGTCTACTCCAAGAACGTGAAGGTGGCCCTGATGAGAAATGGGGAGCGGATCATTCACACCATGGACAAATATCAGAACAGTGAAGACCAGGCCGCAGGGGGCACTGTTCTGCACTTAGATGCAGGAGACAGGGTGTGGCTGCAGGTGGTGGGAGGAGAGTTCTTCAACGGGCTGTTCGCAGATGAGGATGATGACACGACCTTCTCAGGGTTTCTGCTCTTTGCCAACTGA

Function

GO: NA

KEGG:

id description
K24213 C1QTNF9; complement C1q and tumor necrosis factor-related protein 9

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016585 True 1023 mRNA 0.57 3 25407227 25408906

Neighbor

gene id symbol gene type direction distance location
AMCG00016571 pan3 coding upstream 144771 25242014 ~ 25262456 (+)
AMCG00016576 NA coding upstream 206687 25200142 ~ 25200540 (+)
AMCG00016567 gsx1,LOC106603173,LOC106563638,LOC107560336,LOC107719766 coding upstream 223995 25182231 ~ 25183232 (+)
AMCG00016568 NA coding upstream 301057 25103687 ~ 25106170 (+)
AMCG00016560 NA coding upstream 318290 25087611 ~ 25088937 (+)
AMCG00016588 rpl19,LOC107084780 coding downstream 106573 25515479 ~ 25520165 (+)
AMCG00016587 NA coding downstream 125143 25534049 ~ 25542045 (+)
AMCG00016586 NA coding downstream 144574 25553480 ~ 25559207 (+)
AMCG00016603 NA coding downstream 470440 25879346 ~ 25887229 (+)
AMCG00016606 NA coding downstream 497218 25906124 ~ 25918145 (+)
G14448 NA non-coding upstream 40851 25363896 ~ 25366376 (+)
G14445 NA non-coding upstream 46419 25360471 ~ 25360808 (+)
G14444 NA non-coding upstream 48192 25357887 ~ 25359035 (+)
G14383 NA non-coding upstream 137032 25269838 ~ 25270195 (+)
G14363 NA non-coding upstream 262445 25144582 ~ 25144782 (+)
G14455 NA non-coding downstream 13537 25422443 ~ 25423026 (+)
G14502 NA non-coding downstream 195733 25604639 ~ 25611689 (+)
G14510 NA non-coding downstream 263353 25672259 ~ 25678349 (+)
G14556 NA non-coding downstream 525045 25933951 ~ 25935581 (+)
G14623 NA non-coding downstream 756724 26165630 ~ 26165982 (+)
AMCG00016584 NA other upstream 2387 25370296 ~ 25404840 (+)
AMCG00016566 NA other upstream 249766 25150348 ~ 25157461 (+)
G14361 NA other upstream 273348 25133198 ~ 25133879 (+)
AMCG00016558 rpl21,LOC107591224 other upstream 322130 25080674 ~ 25085097 (+)
G14326 NA other upstream 396540 25007962 ~ 25010687 (+)
AMCG00016598 NA other downstream 316347 25725253 ~ 25758926 (+)
AMCG00016607 NA other downstream 531622 25940528 ~ 25950176 (+)
AMCG00016625 mllt10,LOC106942732 other downstream 876896 26285802 ~ 26302514 (+)
AMCG00016633 NA other downstream 1018433 26427339 ~ 26433656 (+)
AMCG00016640 NA other downstream 1081032 26489938 ~ 26499242 (+)

Expression


Co-expression Network