AMCG00016587


Basic Information

Item Value
gene id AMCG00016587
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25534049 ~ 25542045 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016587
CCTACCCCCTACCCCCTACCCCCACTCACACAATCCAGCACAGAACAGCAGCTAATTCAGTACCAGGCACTCAAATTACTGGCTCTGCTCAAATCAGTGCCGAAGACAGAGGGGCGGGGAATCAGAACAGGGTGGGAAAAAACGGAGAGAGAGTgactgtgagagtgtgtgtgagggagggagggggagacgCAAGGAGCAATTGCTGAGATTATGGGAGTCTTGGGAAAAGCTGGAACGTAGTAGGCTGAACTacactgagagagtgagagaaactgataggaaaataaatagtggaaaaaataaagaaaatgaaaagacagtCACTTCTGCTGTAAGGTGAGGAGGGGGACAGAAGGGTGAGAGGAAAGAAGTGTGGAGGGTATTGGAAAAAGGTTACAGGCAGGACAAGCCAGAGAAGACTGGGGTGAAGTGGAGGAGGTATAGAACCGGGGGGGAGAAAGCTACAGGAAGAGAGAGTAGTAAAAGagataaagagaaaaaagaagaagtgtgatagagaaagagacagagaggaaaaggAGTGGGACAGAAGGACAGACAAACAAGGTGCAGAGAGGAGGGAGATCTAGAGAAAGATAGGGAGGCAGCAGAGAAGGGGACACGGAGCGAGTGAGGGAAGGAGAGAttgggaaagggagagggagagggagaaggaggttaggagagaagaggggagaaagaggggaggggagagtaATGAGGCGATTCATTGTGAAGTTGCTGTTTTCGTTGATGCTGTGTCTGTTCATCCTGGGGACAGTACTGATGAGCTTCTGGTACACCTTCAGCTACAGGGAACAGTCTGTGATTGACAGGCTGCTGCAGACACACATTGTTGACTGGGAGAAACAGGAACACAAATTCCAGAGTTTCAGGGCTCAGCTGAACAGCAGGTGTGACGGTCTCTCCAAGGCCATCATCTCACAGACCAACACCCCCCTGGGGTCAAAGGTTGTGTATGACGGGGAAAAGAGGAAGCCCATCCAGGTCACCCCCAAACTGTTCAGCACCTTCCCCAAGGAGCATCCTTTTGGAAATCGGACTTTCACGTCATGTGCTGTGGTTGGGAATGGAGGGATTCTCATGAACAGCAGCTGCGGAGGAGAGATCGATGAAGCCCAGTTTGTCATCAGGTGTAATCTTCCCCCCGTGGACCATGGCTATCAGAGGGATGTGGGTAACAAGACCAGCCTGGTGACTGCCAATCCCAGCATCCTTCTTGATAAGTTCAATGGGTTGATGGAGCTCCGGCGGCCCTTTGTGGACAGCCTGGGCAGCTACGGGGATCCCCTGCTGGTGCTTCCTGCCTTCTCCTACAGCCGCAACACCCCCGTGTCCCTGCGGGCCCTCTACACCCTGCAGGACTTTGACAGCCCTGTACGCCCCGTCTTCTTGAACCCAGAGTACCTGCACAACCTGGCACGTTTTTGGAAGGCACAGGGCCTGCAGGCGATACGTCTCAGCACTGGGCTCATCATGGCCAGCCTGGCCCTGGAGCTCTGTGCTAATGTGCAGCTCTACGGCTTCTGGCCCTTCTCCAAGGACCCCCACAGCAAGCACCCACTCACCAACCACTACTACGATGACCAGCAGGCCAAGAAGACTATCCACGCCATGTCCACTGAATTCAGCCATCTGCTCATGCTCCATAACCAGGGCATCATTAGGGTTCAACTCGGAAAATGCCAGGCCGGCACCAGGAGGGCCACACCCTCGCTCCACCCCCCCGTCTCCCCACTGCGGCACTGACGCACTGCACTGAGCTCTGTGACTGTATCACgtagtgcatttattttcacttccacaagaaacacaggcagacagaccTGGGTTCAATTATTTGCACTTGgaattttatttacagttattcactgtgtatacacacatacactcacctaaaggattattaggaacaccatactcaTACTGTGTTTGAC

Function

GO: NA

KEGG:

id description
K06615 SIAT8F; alpha-N-acetyl-neuraminate alpha-2,8-sialyltransferase (sialyltransferase 8F)

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016587 True 1961 mRNA 0.52 6 25534049 25542045

Neighbor

gene id symbol gene type direction distance location
AMCG00016588 rpl19,LOC107084780 coding upstream 13884 25515479 ~ 25520165 (+)
AMCG00016585 NA coding upstream 125143 25407227 ~ 25408906 (+)
AMCG00016571 pan3 coding upstream 271593 25242014 ~ 25262456 (+)
AMCG00016576 NA coding upstream 333509 25200142 ~ 25200540 (+)
AMCG00016567 gsx1,LOC106603173,LOC106563638,LOC107560336,LOC107719766 coding upstream 350817 25182231 ~ 25183232 (+)
AMCG00016586 NA coding downstream 11435 25553480 ~ 25559207 (+)
AMCG00016603 NA coding downstream 337301 25879346 ~ 25887229 (+)
AMCG00016606 NA coding downstream 364079 25906124 ~ 25918145 (+)
AMCG00016604 NA coding downstream 387532 25929577 ~ 25933057 (+)
AMCG00016605 NA coding downstream 414086 25956131 ~ 25958833 (+)
G14455 NA non-coding upstream 111023 25422443 ~ 25423026 (+)
G14448 NA non-coding upstream 167673 25363896 ~ 25366376 (+)
G14445 NA non-coding upstream 173241 25360471 ~ 25360808 (+)
G14444 NA non-coding upstream 175014 25357887 ~ 25359035 (+)
G14383 NA non-coding upstream 263854 25269838 ~ 25270195 (+)
G14502 NA non-coding downstream 62594 25604639 ~ 25611689 (+)
G14510 NA non-coding downstream 130214 25672259 ~ 25678349 (+)
G14556 NA non-coding downstream 391906 25933951 ~ 25935581 (+)
G14623 NA non-coding downstream 623585 26165630 ~ 26165982 (+)
G14695 NA non-coding downstream 671249 26213294 ~ 26215317 (+)
AMCG00016584 NA other upstream 129209 25370296 ~ 25404840 (+)
AMCG00016566 NA other upstream 376588 25150348 ~ 25157461 (+)
G14361 NA other upstream 400170 25133198 ~ 25133879 (+)
AMCG00016558 rpl21,LOC107591224 other upstream 448952 25080674 ~ 25085097 (+)
G14326 NA other upstream 523362 25007962 ~ 25010687 (+)
AMCG00016598 NA other downstream 183208 25725253 ~ 25758926 (+)
AMCG00016607 NA other downstream 398483 25940528 ~ 25950176 (+)
AMCG00016625 mllt10,LOC106942732 other downstream 743757 26285802 ~ 26302514 (+)
AMCG00016633 NA other downstream 885294 26427339 ~ 26433656 (+)
AMCG00016640 NA other downstream 947893 26489938 ~ 26499242 (+)

Expression


Co-expression Network