AMCG00016591


Basic Information

Item Value
gene id AMCG00016591
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25413316 ~ 25420371 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016591
GGTGGGTGTTCATAGGCTATCAGATGAGAAGATGGAGACTCTGTTCTCTGCTCTCAGCACAGTGCAGACTCTGGCAGAGGTCCAGCTCGCTCTGGACAGCCTCACAGAGAGAGGTGCTGCCAGCCTCATCCATCTCATCCAAAACTGCGGCCAACTACAGGTCCTGAGaatCACTGTGAAGGGAAGGGATGACTCGTATATGTCAGCAACCCTGAGCACACCAGGCAGGCTGAAGGAGGATGTGTTGTTGGGATGTGAAGatgtaaatgtttctgaaattatTCTGCTCTGTGGAGGCCTTAGAGACAGCGGTGTCATTATAAAGGATTTGGAGTTGGAATGtcataatgtaaatgtttatgaaaaGATTCTGCTCTGCGGAGAACTGAGAGAGCGTGGGGTCATTGTAAAGGATTTGCAgGTGGTGGTTTGTCGGCTGCCAGATGAGAAGCTGGAGGATCTGTGCTTTGCCCTTAGCACACTGCAGGCTCTGTCAAAGGCAGAGCTCACTCTCAACAACCTCACAGAAAGATGTGCTACTAGCTTAATGCATCTCATCCAGAGCTGCGGCCGTCTACAGAAACtgagAGTCTCTTGTGGTTTGCTGCTCGAGCCAGGAATCAGAGTGCTACGTGAATCCCAGAGGCGTCCCGACTGCTCCCTCATCATTGACGGGTGGAGATGTAACAAGCCAAGTGACCAGTGCCTGGATTTGGAGCTGTGTAATCAGACCTGTAATTCACACGTGTGCCTGAAGATCTTAGGGACATCGTTCATAGAAGAGCCTTATGGGGGGGGCAAGGGATGCAGAAAGCAGCGTTACTTGTATACTAGTGAACCTGCTGCAGAGTAACAACAGCTTTAGTAACAAGGGATTTTCAAACAGATTGCAATATTCATAAAGTacttaaacacttattttgtaaaacatatttaagtgAAAGTGAATGATATTGGCAGTCATTAATGAATCGATAGAAACAGATGCCAAGCATTGTATGAATATGGTAGTTCCAGAACAAAATGCATTCCCTTTTGATGACATCAGGACTTCCCTGAGTGCCATCGGTAGTTGTTGCAATCTGGAGACATGGAATCTGGTGACCGCACAGCCAATACAGttgataaaatgtaatataaaaaagtaaaatattcaaaaatgaGGCAAAACTATATGGTCCGAAACTGGGGTCTGCGGTTGGCTGATTTATCAGATTCACATTCTCGACTCACTGCATCACAAGCTAAAGCTGCCCGAGCAGCACACATCGCATCGTTCACAGCTTGCCTTTGTGACACGGGACTAATGGACTGCCAtgattttcacatttgattcaaatgattaaattctttaatttcattacCGCATATTTACAATCTTTAATGGTCCTTCGGTTTGAACAGTAGTTGAGAAACACCTGaacatttataattacaatatacaacTACAGCTTAGTCCAAATTGGCATAATGCAGATGcaatatgacattttttttcaaaatattgagCAGAGTGgagtaatatatatttcagatgttcagttgtacttttttttttcttttacaatagTGATCCTCCAAGCTGTCATTAGTTTAggcttataaaaataaaatatgaatgttttacataagcctacctgagtaaataattatattaatcaagaaattgggagctcctgttgaaacaaaaaccaacagacactgtggccccccaggactggagtctggcACCCATTCCCTGGGGAAATTCCAAGGAAGCCCCATCCAATGACAGGCTCAAGCTGCTAGCAGATTTGGTTTCTAAATCCAGAACTAAAGAGACAAATGATTACAGGTGAATCctaaccttaaaaacaaaacaatattgcagTATGTCATTCCACCATCTTCTCTCAATTGGctcaacacaacaacaaaataaaccacaagaTACTTTTGACtggcaaatttaaaatgtaacattaccGTAAAAAGAAATCTGGCTTGTTTGATATCAAATGTAAGGTCATGCCTtaagggacttgaaaatgtaaatcaaagaACACTAAAACGACAATATAGAATAAGAAGGAAAGTCTGCGTAACATTTGTACCATTGTCTTATTCCTCGAAGCCATCACACCTCCAATAGACATTCTGCAGAAAgtaagggagaggaatggcaaggGCTTCGTCGATTGAAATCTCTTTGTCTGAAACATCAAAGCAGAAAGTAAAAACTACCAATTTGGAGCGAAACAACCTGGGATCGAAAACTTAGGAGTGGATGCATCCAAGGAAACAAGTCTCTGGAGCATCACC
>TU17955
TCAAGCTGCTAGCAGATTTGGTTTCTAAATCCAGAACTAAAGAGACAAATGATTACAGGTGAATCctaaccttaaaaacaaaacaatattgcagTATGTCATTCCACCATCTTCTCTCAATTGGctcaacacaacaacaaaataaaccacaagaTACTTTTGACtggcaaatttaaaatgtaacattaccGTAAAAAGAAATCTGGCTTGTTTGATATCAAATGTAAGGTCATGCCTtaagggacttgaaaatgtaaatcaaagaACACTAAAACGACAATATAGAATAAGAAGGAAAGTCTGCGTAACATTTGTACCATTGTCTTATTCCTCGAAGCCATCACACCTCCAATAGACATTCTGCAGAAAgtaagggagaggaatggcaaggGCTTCGTCGATTGAAATCTCTTTGTCTGAAACATCAAAGCAGAAAGTAAAAACTACCAATTTGGAGCGAAACAACCTGGGATCGAAAACTTAGGAGTGGATGCATCCAAGGAAACAAGTCTCTGGAGCATCACCAGACGAATCGAGCAAGAACTTCTGAACACTAAGAACATTCTGGAAATCTGACCAACAATACTCAAATTGACAGAGCCTGCAGCGTTCCCTGCTATCGAACCAATGAATGTCCGTTTCAACTTTTTCTTTCAACATCCTTTATCATTCACAGTATTTTGTCCTTCCTCTTAGTTAATTTTACTGCAGTTAGGGCTAGAACTGCAAATTGAAGTATCTGTATTTTGTGAACAGTCTAAGACAGCATGGGTAAaggtgtct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016591 True 2301 mRNA 0.42 7 25413574 25420371
TU17955 False 783 lncRNA 0.38 1 25413316 25414098

Neighbor

gene id symbol gene type direction distance location
AMCG00016592 abhd10,LOC106590440 coding downstream 45737 25363398 ~ 25367579 (-)
AMCG00016589 NA coding downstream 52634 25357887 ~ 25360682 (-)
AMCG00016593 tagln3b,tagln3,LOC107701685,LOC107705223 coding downstream 55869 25353341 ~ 25357447 (-)
AMCG00016582 NA coding downstream 64174 25347445 ~ 25349142 (-)
AMCG00016577 NA coding downstream 65879 25326868 ~ 25347437 (-)
AMCG00016590 NA coding upstream 912 25421283 ~ 25423659 (-)
AMCG00016595 LOC106600984,LOC106607252,LOC107754318,LOC105013306,LOC107670909,LOC107745936,LOC107567387 coding upstream 13463 25433834 ~ 25438775 (-)
AMCG00016596 NA coding upstream 18965 25439336 ~ 25449752 (-)
AMCG00016594 cacnb1,LOC106600985,LOC103392742 coding upstream 29538 25449909 ~ 25483710 (-)
AMCG00016597 NA coding upstream 191192 25611563 ~ 25642333 (-)
G14472 NA non-coding downstream 8215 25404895 ~ 25405101 (-)
G14400 NA non-coding downstream 290941 25122090 ~ 25122375 (-)
G14311 NA non-coding downstream 506770 24905121 ~ 24906546 (-)
G14245 NA non-coding downstream 633050 24716726 ~ 24780266 (-)
G14222 NA non-coding downstream 728781 24683065 ~ 24684535 (-)
G14487 rpl19,LOC101068736,LOC103368168 non-coding upstream 96618 25516989 ~ 25520096 (-)
G14496 NA non-coding upstream 122675 25543046 ~ 25545725 (-)
G14507 NA non-coding upstream 184409 25604780 ~ 25609059 (-)
G14517 NA non-coding upstream 251933 25672304 ~ 25675200 (-)
G14578 NA non-coding upstream 497659 25918030 ~ 25921548 (-)
AMCG00016579 NA other downstream 135838 25264772 ~ 25277478 (-)
G14392 NA other downstream 329617 25080568 ~ 25083699 (-)
AMCG00016562 rnf6 other downstream 397973 25007974 ~ 25015343 (-)
G14305 NA other downstream 531218 24881148 ~ 24882098 (-)
AMCG00016538 smpx,LOC107721880,LOC107590224,LOC107663668,LOC107705278 other downstream 846360 24553692 ~ 24566956 (-)
G14534 NA other upstream 332624 25752995 ~ 25754472 (-)
G14637 NA other upstream 661132 26081503 ~ 26083167 (-)
AMCG00016617 NA other upstream 727139 26147510 ~ 26149543 (-)
AMCG00016616 sp6,LOC102212756,LOC101463567,LOC100707362,LOC107396441,LOC106564946,LOC103384358 other upstream 736150 26156521 ~ 26159922 (-)
G14676 NA other upstream 761373 26181744 ~ 26184778 (-)

Expression


Co-expression Network