AMCG00016592 (abhd10,LOC106590440)


Basic Information

Item Value
gene id AMCG00016592
gene name abhd10,LOC106590440
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25363398 ~ 25367579 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016592
CCCCGTCCCCGCCAGTCTCGGGCAGAACGTCGTGAACTCTCGCGGTGTTTGGGCCGCAGCTTCAGAGCAGCATGGCGGCGGCGGCGATGCGGAGCTGCTGCAGGGGAGTCCTGCAGGCGGGCGGCCACGGCAGAGCTACTCCCCTGTGGCCCCGGCGCACCGGAGGTCAGTCCCGCTGAGTGTCGGCGACCTGTTCAACACGCTCTGAATGGCGAGGGCAGCCGTGGCGGATAATGAAGCGAGAGGTCGGGGGTGTGTCATCAGGGCGGCCGGAGAGATCTTCGTTTCCTTACATTGTCGTAAAACGGTCCGTCCGTCCGCAGTACCGCTGTCGTGAACGTGTTGACAGTGAAGACTAGCGGCCGGTCGTTTCTCTACGGGTCCCTCAGGTTGATCATTTACCAGCTTCAGCGAGCTCTTCTGTTGGTTTTATTGGAAGAAGATTTACTGAAGGGAGGATGGAAAACGTTGGGAAGCACAGGAGCTGGCTGAGGGAAGCAGGATTAAGACAGAAGTCATCAGTGCAGTATTTAAATCGCCCAGATCTTCCAAAGCTGGCCTACCAGAGAATTAAAGGCAAGAGCCCCGGCGTGGTGTTCCTGCCTGGCCTCGCCTCCAACATGAACGGGCAGAAGGCAGAGGCGCTGGAAGATTTCTGCAAATCTTTAGGTCATTCGTATTTAAGGTTTGATTACACGGGATGTGGGGCGTCGGAAGGTGTGTGGGAAGAGTGTACGCTCGGCACGTGGAAGAAGGATGTGCTGACCGTGCTGGACGAGCTCACAGAAGGACCACAGATCTTGGTGGGTTCTAGCATGGGCGGCTGGCTGATGCTCCTTGCCGCGATCGCTCGGCCGGAGAAGACCGCGGCTCTTATTGGCATCGCCAGTGCTACGGATCACTTCGTCACTGCTTTTAAATCCCTTCCTATAGAGGTGCGCAAAGAAACGGAAGAGAAAGGGGTGTGGAAGTTGGTGAGCAAGCACAGTGAGGAGGGCTTCTATAACATGCGCCTGGAGTTCATTAAGGAGGCGGAGAACCACTGCATGCTGCAGAGCCCCATTCCTGTCACCTGCCCTGTGCGGCTCATCCACGGCATGCAGGACCAGGACGTCCCCTGGCACGTCTCCATGCAGGTGGCCGAACGTGTACTGAGCACCGACGTGGACGTCGTCCTGCGCAAACACGGCACGCACCGCATGTCTGAGAAGGACGACCTCAAGCTGCTGGTCTACACTATCGACGACCTCATCGACAAGCTCACCACGCTGGCCTGAGCGGACTGGAGTCGACCTTCCTTCTCCTGGCTTCTCTTCTGGGCACTGTGAAGGCAGTTCATTGCCACGCTTATGCAATTAAAGAAAAGGGGATCACCAAAGTAAACAAAACTGTCCGAGAAGTaaaagacacacagacgcagagaaaagctttttttgaaCCTTCTATTCCATTTTGCCTTACAGatggagttttattttattttatttttgatagtAGTTAAATTGCAGTGTGTTTGTAGTCACACTAGGTTATGTAAAAGATGctgctatttttgtttctatgacagaacccccccccccgcatgTCCCGGAGCTATTTTTCCTACTGTTTTgtaccaacacacacacacacacacacaaatctataTTCATGTTCCTGTGCCTATTTTTATGACTTTGTTCCACAGAATTTGCCATGGTGTTTATgtatactttcaaataaacatggtATGTTGCCTGGAATGggtttcctttttctgttgtGATACGTGTGGGGTTACCATGGCTAGTACAGACTGCCAGTGCTCGAAGATCACCTCTTTAGATCCATTATTTATAGGGtatatctttgttttattgacCTTGCAGAACTGTTTATATATCCGGTGTGTATCTTTGATAATTTATGATTTGTTCTCCAGTACTGTCTGCCGGCTTGCTCAGCCCTCAGAGACTGTGCATCTCAGTGCCAGAGACAACAAACTCATATCATCAATATGCCATTAGAGGGCAGCAaatatcaaggaaattataatggTCAACTCACCTGCAATTACTAGCTGATTGACTTTCTGCCAAGTTTCTCCTCAAGGTTTGAAGTATACAGGAATTGACTCCTTCTATGTCTACCTTATTGGTCTGTTGGCACCTGGAGCCGACACATTTCCTGTGACAGCACAATGTCAGTTCTCACCGTTGCCATAGATTTATGCATGAATTGCaagaaccattttttttttt

Function

symbol description
abhd10 Enables hydrolase activity, hydrolyzing O-glycosyl compounds and palmitoyl-(protein) hydrolase activity. Involved in glucuronoside catabolic process and protein depalmitoylation. Located in cytosol and mitochondrion.

NR:

description
PREDICTED: mycophenolic acid acyl-glucuronide esterase, mitochondrial

GO: NA

KEGG:

id description
K13702 ABHD10; abhydrolase domain-containing protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016592 True 2240 mRNA 0.50 6 25363398 25367579

Neighbor

gene id symbol gene type direction distance location
AMCG00016589 NA coding downstream 2716 25357887 ~ 25360682 (-)
AMCG00016593 tagln3b,tagln3,LOC107701685,LOC107705223 coding downstream 5951 25353341 ~ 25357447 (-)
AMCG00016582 NA coding downstream 14256 25347445 ~ 25349142 (-)
AMCG00016577 NA coding downstream 15961 25326868 ~ 25347437 (-)
AMCG00016580 NA coding downstream 37928 25318898 ~ 25325470 (-)
AMCG00016590 NA coding upstream 53704 25421283 ~ 25423659 (-)
AMCG00016595 LOC106600984,LOC106607252,LOC107754318,LOC105013306,LOC107670909,LOC107745936,LOC107567387 coding upstream 66255 25433834 ~ 25438775 (-)
AMCG00016596 NA coding upstream 71757 25439336 ~ 25449752 (-)
AMCG00016594 cacnb1,LOC106600985,LOC103392742 coding upstream 82330 25449909 ~ 25483710 (-)
AMCG00016597 NA coding upstream 243984 25611563 ~ 25642333 (-)
G14400 NA non-coding downstream 241023 25122090 ~ 25122375 (-)
G14311 NA non-coding downstream 456852 24905121 ~ 24906546 (-)
G14245 NA non-coding downstream 583132 24716726 ~ 24780266 (-)
G14222 NA non-coding downstream 678863 24683065 ~ 24684535 (-)
G14218 NA non-coding downstream 745053 24615787 ~ 24618345 (-)
G14472 NA non-coding upstream 37316 25404895 ~ 25405101 (-)
G14487 rpl19,LOC101068736,LOC103368168 non-coding upstream 149410 25516989 ~ 25520096 (-)
G14496 NA non-coding upstream 175467 25543046 ~ 25545725 (-)
G14507 NA non-coding upstream 237201 25604780 ~ 25609059 (-)
G14517 NA non-coding upstream 304725 25672304 ~ 25675200 (-)
AMCG00016579 NA other downstream 85920 25264772 ~ 25277478 (-)
G14392 NA other downstream 279699 25080568 ~ 25083699 (-)
AMCG00016562 rnf6 other downstream 348055 25007974 ~ 25015343 (-)
G14305 NA other downstream 481300 24881148 ~ 24882098 (-)
AMCG00016538 smpx,LOC107721880,LOC107590224,LOC107663668,LOC107705278 other downstream 796442 24553692 ~ 24566956 (-)
AMCG00016591 NA other upstream 45737 25413316 ~ 25420371 (-)
G14534 NA other upstream 385416 25752995 ~ 25754472 (-)
G14637 NA other upstream 713924 26081503 ~ 26083167 (-)
AMCG00016617 NA other upstream 779931 26147510 ~ 26149543 (-)
AMCG00016616 sp6,LOC102212756,LOC101463567,LOC100707362,LOC107396441,LOC106564946,LOC103384358 other upstream 788942 26156521 ~ 26159922 (-)

Expression


Co-expression Network