AMCG00016597


Basic Information

Item Value
gene id AMCG00016597
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25611563 ~ 25642333 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016597
ATGACGGAGAACAGCGAGAAGGAGAATGAGCCCCAAAACCGGGATCTCCAGCGCTCACCTGGCACTGTGTCTGTCCAGCCCGAGTCCAAGCTGCAGAGGCTGAAGCGCTCGCTCTCATTCAAGACCATGATGCGCAGCAAGAGCGTGGAGAACTTCTTCCAGAGGTCCAACAGTGAGATTCGGTTCCCCAGCGACCTCATCACAGCGCTGCCCCCGTCTCCTCCCCTGCCGCCTGATACCCCTCCTCTAAACCACGGTGACCCCTCCCAAagccccaccccctctctcagCCCCAACGCCTCCCAAAGCCCCAGCCCCTCTCTTTCCTCCAAGCCCCCAGCACAGCTCCGCCCTGTGAAGACCCACTGTTTCCAGGAATATGTCTTCCGCCGGCCCACCTACTGCCAGCTCTGCAAGCACATGATTGTTGAACTGTCCAAGCAGCAGTGCAATGGGAAGtcaggGGCATTCAAACGCAACTTCAGCTCTCCGCTGCTTGTTAACGATCAGCTAGGAGTCGTTAAGGAAGTCCCTCCTCCTGCAGTGGTGAAGAACCGCGTGGACCCTGTGTACGAAACCCTGCGCTATGGCACATCTCTGGCACAGATGAGTCGATCCAGCTTCGGCAGCGTCTCTGAGTCACCCACCAGAAGCATGggTGAGAGGAGTGAGGGGGCGGATGATGGGGAGGACAGTCAGCGCAGCACCGAAGAGGAGGGGACCCAGACGCCTGTGGCTCTCAATCCCTCTGAAACTGAGAAGGCCATATCTGAAGACAGAGTCAGCTTGAAGGCTACAAAGCGGATCGAGGTGCATGCCATACACACCTACGTAGTGCTGTACAAATTTCTCCCCCAGGAGCTGAATGACCTAGAGCTGCAGGTaatggagggagagaaaaaacatctaTTTGACTTTATTGCTGCCCCCCTTGACGTTATGTTGGTGGGGAAGAGTGGAGACAAGGTGGGCTTCTTCCCGGCCAACTTTGTGCAGCGGGTGAGGCCGGGGGAGAGGGTGTGGAGGGTCACCCAGTCCTTCCATGGCAACCGCGAGCTTGGACAGATGACCGTGAAAGAGTCCCAGATCTGCGTGGGGAAGAATGAGGAGGTGAACGGCTTTCTGAGGCTGACCAGCGGGAAGAAGCGTGGCCTAGTCCCTTGCGACCTGCTGGAGGAGATCTGA

Function

GO: NA

KEGG:

id description
K23712 STAC2; SH3 and cysteine-rich domain-containing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016597 True 1185 mRNA 0.58 11 25611563 25642333

Neighbor

gene id symbol gene type direction distance location
AMCG00016594 cacnb1,LOC106600985,LOC103392742 coding downstream 127853 25449909 ~ 25483710 (-)
AMCG00016596 NA coding downstream 161811 25439336 ~ 25449752 (-)
AMCG00016595 LOC106600984,LOC106607252,LOC107754318,LOC105013306,LOC107670909,LOC107745936,LOC107567387 coding downstream 172788 25433834 ~ 25438775 (-)
AMCG00016590 NA coding downstream 187904 25421283 ~ 25423659 (-)
AMCG00016592 abhd10,LOC106590440 coding downstream 243984 25363398 ~ 25367579 (-)
AMCG00016600 fbxl20,LOC107727724,LOC107666314,LOC107665129,LOC107549884,LOC107563017 coding upstream 34236 25676569 ~ 25703327 (-)
AMCG00016599 med1 coding upstream 63748 25706081 ~ 25726547 (-)
AMCG00016601 neurod2,LOC102791336,LOC102193051,LOC101464503 coding upstream 182413 25824746 ~ 25825846 (-)
AMCG00016614 NA coding upstream 462583 26104916 ~ 26117450 (-)
AMCG00016615 NA coding upstream 509278 26151611 ~ 26155450 (-)
G14507 NA non-coding downstream 2504 25604780 ~ 25609059 (-)
G14496 NA non-coding downstream 65838 25543046 ~ 25545725 (-)
G14487 rpl19,LOC101068736,LOC103368168 non-coding downstream 91467 25516989 ~ 25520096 (-)
G14472 NA non-coding downstream 206462 25404895 ~ 25405101 (-)
G14400 NA non-coding downstream 489188 25122090 ~ 25122375 (-)
G14517 NA non-coding upstream 29971 25672304 ~ 25675200 (-)
G14578 NA non-coding upstream 275697 25918030 ~ 25921548 (-)
G14585 NA non-coding upstream 329453 25971786 ~ 26022263 (-)
G14587 NA non-coding upstream 331201 25973534 ~ 25979563 (-)
G14650 NA non-coding upstream 455395 26097728 ~ 26098972 (-)
AMCG00016591 NA other downstream 191192 25413316 ~ 25420371 (-)
AMCG00016579 NA other downstream 334085 25264772 ~ 25277478 (-)
G14392 NA other downstream 527864 25080568 ~ 25083699 (-)
AMCG00016562 rnf6 other downstream 596220 25007974 ~ 25015343 (-)
G14305 NA other downstream 729465 24881148 ~ 24882098 (-)
G14534 NA other upstream 110662 25752995 ~ 25754472 (-)
G14637 NA other upstream 439170 26081503 ~ 26083167 (-)
AMCG00016617 NA other upstream 505177 26147510 ~ 26149543 (-)
AMCG00016616 sp6,LOC102212756,LOC101463567,LOC100707362,LOC107396441,LOC106564946,LOC103384358 other upstream 514188 26156521 ~ 26159922 (-)
G14676 NA other upstream 539411 26181744 ~ 26184778 (-)

Expression


Co-expression Network