AMCG00016603


Basic Information

Item Value
gene id AMCG00016603
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25879346 ~ 25887229 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016603
ATCCGTCGCAGAAGGCCGACCCCTGCAACCCTCTTCAGAGTGTCAGACCACTCCTCCCCAGAAGAGGAGAACTCCTCCCACCAGTGGGTTGTAGGTGAGAATGGAATCCTCAAACCCAAGCGGTCCAACCCCTGTGTGTATCACCCCCCCTCACTGAGAGcTGTACAGCGGATGGCTCAAATCCACATGCAATCTCTGGGTGCATACCCCCCCCTGGAGGACCCCCCAGAGGGGGCGGAGAGTGAGGATGGCCCCCCAGAGGTGGAGCAACGGGATGAAAGCCCCTTTGTCCCCACAGACAGCCTGGCGGGTGAGAGGGGCGGCCCGGGAACCTTGCTGTCCAGAGACGCACAGCCCAGCTAG

Function

GO: NA

KEGG:

id description
K15494 PPP1R1B, DARPP32; protein phosphatase 1 regulatory subunit 1B

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016603 True 363 mRNA 0.62 3 25879346 25887229

Neighbor

gene id symbol gene type direction distance location
AMCG00016586 NA coding upstream 320139 25553480 ~ 25559207 (+)
AMCG00016587 NA coding upstream 337301 25534049 ~ 25542045 (+)
AMCG00016588 rpl19,LOC107084780 coding upstream 359181 25515479 ~ 25520165 (+)
AMCG00016585 NA coding upstream 470440 25407227 ~ 25408906 (+)
AMCG00016571 pan3 coding upstream 616890 25242014 ~ 25262456 (+)
AMCG00016606 NA coding downstream 18895 25906124 ~ 25918145 (+)
AMCG00016604 NA coding downstream 42348 25929577 ~ 25933057 (+)
AMCG00016605 NA coding downstream 68902 25956131 ~ 25958833 (+)
AMCG00016602 pgap3,LOC107694083,LOC103358570 coding downstream 74317 25961546 ~ 25973771 (+)
AMCG00016609 NA coding downstream 95728 25982957 ~ 26018921 (+)
G14510 NA non-coding upstream 200997 25672259 ~ 25678349 (+)
G14502 NA non-coding upstream 267657 25604639 ~ 25611689 (+)
G14455 NA non-coding upstream 456320 25422443 ~ 25423026 (+)
G14448 NA non-coding upstream 512970 25363896 ~ 25366376 (+)
G14445 NA non-coding upstream 518538 25360471 ~ 25360808 (+)
G14556 NA non-coding downstream 46722 25933951 ~ 25935581 (+)
G14623 NA non-coding downstream 278401 26165630 ~ 26165982 (+)
G14695 NA non-coding downstream 326065 26213294 ~ 26215317 (+)
G14703 NA non-coding downstream 347097 26234326 ~ 26304342 (+)
G14704 NA non-coding downstream 351941 26239170 ~ 26241244 (+)
AMCG00016598 NA other upstream 120420 25725253 ~ 25758926 (+)
AMCG00016584 NA other upstream 474506 25370296 ~ 25404840 (+)
AMCG00016566 NA other upstream 721885 25150348 ~ 25157461 (+)
G14361 NA other upstream 745467 25133198 ~ 25133879 (+)
AMCG00016558 rpl21,LOC107591224 other upstream 794249 25080674 ~ 25085097 (+)
AMCG00016607 NA other downstream 53299 25940528 ~ 25950176 (+)
AMCG00016625 mllt10,LOC106942732 other downstream 398573 26285802 ~ 26302514 (+)
AMCG00016633 NA other downstream 540110 26427339 ~ 26433656 (+)
AMCG00016640 NA other downstream 602709 26489938 ~ 26499242 (+)
AMCG00016638 krt222 other downstream 640090 26527319 ~ 26548212 (+)

Expression


Co-expression Network