AMCG00016614


Basic Information

Item Value
gene id AMCG00016614
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 26104916 ~ 26117450 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016614
ATGTCTGGGGCCGTGATGGAGCTGATGTTGCTCCAGCTGCTCCTGCTCTCTGTGCCTCCGGGCTCTGGCTCCAGCAGCTTTCTGTACCAAAAGGCAGAGTCTACCATCAGACCGGGAACTGGTGGCCCCACAGGTACAACCTTGACCACAGGGCCCCCCGGCAGCACCTGGCCAGAGACTCAGGGTCCCACTGTCAGTAGCACACCCCCCAGCTCACCCCCACCCTCTCCCAGCCTGGCCACTACAGAGCTGCCTGCAGACCCAGCCCAGGGGGGGGCAGACAGCTGGGAGGTGGTGGAGGCGTTCCTGTACAGCGGTGATGCGGAGCACCTGGCCCAGGCCAACTGCACCCAGCAGTACCGCCTGCAGGGTGTGCAGGGAGCAGCCGGACCCAGCCTGCAGCCCTTCCTGCTCAGTGCCCTGGACACACTGACTCACGCCGCCAACTTCCTCAACATGGTCTTCCAGGCCAACGACATCCGCGAGGCCAGTGTGCGGGAGGACATCGAGTGGTACCATGCGCTGGTGCGCAGCCTGCTGGAGGGCGACCCTAAGATCCAGCGCGCCGTGCTGACGTTTGATGCACAGCCCACATCCCCGCGGCCCCAGCTGGTCCTGCAGGCGTCACGTGCTCCAGGCCCAGCAGACATCCTGCTGGAGGACCTGTCCACGGCCTGGGAACGGCTGCACATGCTGGCCAATGGCTCTGACTGGTTCACTGCACTAAAGTTCCCTGAGGGCCGCCCCTTGGCCACCCTGCACAAGCGCACCCTGCGCAACGACCTGCGCACGCTGGACACACCCAAGTGGAGCCGTGGTGACAGCTATGTACTGGACCAGCGTCACGTGCACTGGGCCGATGCCCCCTTCCTGGACTGCCGGGCCGGCCGCTTCCTTCCGGGCTGGCTGGTCTCACTGTCCACCTCTTTCTATGGCCTGAAGCCCGACCTCAGCCCTGAGTTCAGCCTGCAGAGCCTGGATATAGACCAGTGCGCAACGGGAGAGGACTGGTTCTCCAACACACACCTGTGCAACCGCACCAGCATGAAGTGTGAACCGCTGACTGGTCAGGGTTTCCGGCTGGGTCAGTACCAGTGCCGCTGTAAGGAGGGGTTCTACAGCCCCCCCAATGCTGCAGgaggaGAGGAGCCGTCCAGGCGCAGTGCCAGTGGAGAGTGGGGCCCGCGTGTGCCTGTATGTCTGCCCTGCTGGCCAGGCTGCCAGCACTGTTTGGACAGCACCCCCTGCAGTGTGCAGCAGGACTGGCGTGTGCGCGCGGCCGTGCTGGCGGTACAGGCCTTCTTCATGCTGCTTGTCTTCATCAGCATGCTGGTGGCCTACAGGTTCCGCCGCAGCAAGaggATCCGTGCCTCAGGCTTGCTGCTACTGGAGACCATCCTGTTTGGCTCTCTGCTTCTCTACTTCCCTGGCATTGAGCTCTCTGTCGCCCCCCTGCAGGTGTTTATCTTATACTTCAAGCCCAGCACCTTCCGCTGCATCCTGCTGCGCTGGGTCCGCCTGCTGGGCTTCGCCATCGTGTACGGCACCGTGACCCTGAAGATGTACAGGGTCTTGCGGGTATTTGTGTCGCGCACTGCCCAGCGCGTGCCCTACATGTCCAGCACACGGGTGCTGCGGATGCTGGGCGTCATCGTGCTGACAGTCAGCTGGTTCCTGTCAGCCTGGACGGCCGGCGCGCTGCAGAACATGGACCGTAACGTGCCCATGCTGGTGACCTCGCAAACCCGTGAGGGGCTGGACTTCAGCCTTTGTGACCTTGACCGCTGGGACTACATGATGGCTGTGGctgAGCTGCTGTTCCTGTGCTGGGGCAGCGTGCTGTGCCACGCGGTGCGCACAGTGCCCTCTGCCTTCCACGAGCCGCGGTACATGGGCATTGCCATCCATAATGAGATGCTGCTGTCTGCCGCCTTCCACCTGCTACGCCGGCCACTGCGGGAGGAGATTGCAGCGGAGGTGTATGAGGACGAGCTGGACCTACGGCGCTCCGGCTCCTACCTGAACAGCAGCATCACCTCGGCCTGGAGCGAGCACAGCCTGGATCCTGACGATATCCGGGACGAGCTAAAGAAGCTGTATGCCCAGCTGGAGGTCCACAAGACCAAGAAGATGACAGCCAACAACCCACACCTGCAGAAGAAGCGCAGCTCCCGCCGGGGCCTGGGCCGTTCCATCATGAAGCGCATCACTGAGATCCCGGAGTCCATGAGCCGGCAGTGCAGCCGTGAGGACAAGGAGGGCGCCGGGGGGACAGGCAGCCAGACGGGCTCCTGCAAGAAGAAGGCGGGGGAGTCGGGGGGCTCCAGCACACGGACGAAGGAGGACTCCCTGAAGCAGCGTGTACTGTCTCTACGCAAGTCACACAGCACCTATGACCACGTCCGCGACCAACGTGACCACCACCCACGCTCGTGTGAGACCAAGGACTCCTCGCTCCTGGACTCGCTGATGAGGAGGAAGATGGCCAAGAAGGCGTCGGAGCGCTCTGACTGCGAGTCTGTGGATGCTGCGCCGCTCGTCTGCAAGTCGGCAAGTGCCCACAACCTGACTGACAAGCGGCCGCTGCAGCCCCGGGCCAGCAGGCTACAGAAGTCCATGAGTGTCATGGCCGGCCCCCCGGACACGGCCCACCTGCTCCCCAGCAAGGCCTGCAGCCTGGAGGACACCTCACAGGCTGGGGGGGGCAGCCATCAGGGTCGGAGCCTGTTGGATTCACTTGAGGCCACGCTGCTGCTCCGCACTGATGGGGAGCCGCCCCGCGGGCTGAACGCATTGCTCGACCAGGACTTCAACAGGGCAGAGGTCTGCCCCTGGGAGGCGGAGGCCCAGCTGCCCGAGAGTAAATCCCAGAAGCATGTCACCTACGCCTTCAATAGCAATGGAGAGATGGGCAGCCACAGCCTACAGCACAGCCACACCCAGCCAGAGGACGGCACTCTCAGGGTGGAGGAGCTGCCCGGCAGGGGTTGTATGAAAGCTGACCTGGAGGCCCCAGGAGGAGGCAGCCAGGCCGGAGAAACCTGCTCATGGGATTCAGAGACGGACGAGGTGAAGGCCAAGGTCCCAGTATCCTCCAGCGCCCCAGGGTCTCCAGTCAGTGGCCTGGTGAGAGCCAAAGGCTTCTCATATAAAGGGCCTCCCCGGGGATTTGGACTCTCCATGAAAGGCCTGGTGGGGTCAGGGAAAGGCAGCTTGAAGATAAAGGGGAAGAAGGGTTCAgacaagaagaaggagaaaaaggagGAAGCAGGAAAGAGCAAGGGGAAGGGAGCAGCTTCCCAGGCAGCCCCCTGTGCAGAGCCTCCGGTTGAGAAACACAAGGAGGGGTCTCCCACTAGTGGAGAGAGTGGTGCGGCGCTAAAGACAGACAGCGAAGCTGCAACAGGAAGCCCAAAGTCAGAGGTGTGTCCACAGGGTGCAGAGGAGGCCCGAGAGCCTGCAGCCAGCGCTGAGAAATGTGCCACCCAGGCAGACCACAGGATGACCAGGCAGGAGAGCTCAGTTGCCATCGTCTGCCCCTGGGAGGTCGAGGGAGTGAAGCCAGGTGTCCAGAGACAGGCCAGTGTGGTGTGCCCCTGGGAGGGAGTAGAGCCACCACAGAAGACCACAAAGCGGCGGGACAGCACGCTGACAGACGTTTCCCCCCGGGATACTGAGACTGTGTCCTGCCCCCTCCCACAGCCACCAGTCACGGCCTCAGAGAAGGCAACAAAGAGACGTGACAGCACGCTGGCAGACGTCTGTCCCTGGGAGGCCGAGGGAGAGAAGCCAGGTGTCCGGAGACGGTCCAGTGTGGTGTGCCCCTGGGAGGGAGTGGAGCCGCCACAGAAGACCTCTAAGCAGGAGGACAGCACACTGGAGGACGTCTGTCCCTGGGAGACTGAGACACACCCTCGCCCCCTTCCAGAGCCACCAGTCACGGCCTCAGAGCAGTCAACAAATAGACAGGACAGCACGCTAGCGGACGTCTGTCCCTGGGAGGCCGAGGGAGAGAAGCCAGGTGTCCGGAGACGGTCCAGTGTGGTGTGCCCCTGGGAGGGAGTGGAGCCGCCACAGAAGACCTCTAAGCAGCAAGACAGCACACTGGAGGACGTCTGTCCCAGGGAGACTGAGACACACCCTTGCCCCCTTCCAGAGCCACCAGTCATGGCCTCAGAGCAGTCAACAAATAGACGGGACAGCACGCTAGCGGACGACAGCACACTGGAGGACGTCTGTCCCTGGGAGGCTGAGGGGGAGAAGCCCGGTGTCCGGAGACGGTCCAGTGTGGTGTGCCCCTGGGAGGGAGTGGAGCCGCCACAGAAGACCTCTAAGCAGCAGGACAGCACACTGGAGGACGTCTGTCCCTGGGAGACTGAGACACACCCTCGCCCCCTTCCAGAGCCACCAGTCACGGCCTCAGAACAGTCAACAAATAGACGGGACAGCACGCTAGCGGACGTCTGTCCCTGGGAGGCTGAGGACACACCTGCCAAGCACTCAGAAATGGTGTGTCCCCGGCCGGCTGAGGGAAAGAAGCCAGGTGTCCAGAGACAGGCCAGTGTGGTGTGCCCCTGGGAGGGTGTGGAGCCACCACAGAAGAGCACTAAGCGGAGGAACAGCACCCTTGCAGATGTCTGTCCCTGGAAGGTGCCGGAGGCCCGCCCCAGCCCAGCCCACAGCACCACTGCCGAGGTCTGTCCGTGGGAAGCCCCTGAGCCAGCGGGTGGGACGCTGCCCCAGCAGAGTGAGCTGGCAGACGTGTGTCCCTGGAAAACGCAGGAGGCAGAGAGGCCCACCGACTTGCACAGCACGTTTGCTAAGCCCAGCCCTGGTGGCGCTACAGTCACAGAGGCCACCCCCACGACCCAACAAGACAGCAAGGCGGCAGGTACCAGCTCAGTCACGGGGCAGCCGGCcctcagagacagagagactgacCTCGCTCTGGCCCGCAGGGACGCACTGTGCCCCTGGGAGGTGGAGAAGCTCAGAGCTCCGCCAGAGACAGATGACAGCTCTTCAGACATCCTGCCCTGGGAGGCGGAGgcggaggagcagagcgatgaCCCCGAGAGAGACGCGGAGGGATGCCCCTTCCTGTACGAGCCGGACATGGACACTGAGCCCACCACTCAGAAGTAA

Function

GO: NA

KEGG:

id description
K08469 GPR158; G protein-coupled receptor 158

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016614 True 5145 mRNA 0.63 11 26104916 26117450

Neighbor

gene id symbol gene type direction distance location
AMCG00016601 neurod2,LOC102791336,LOC102193051,LOC101464503 coding downstream 279070 25824746 ~ 25825846 (-)
AMCG00016599 med1 coding downstream 378369 25706081 ~ 25726547 (-)
AMCG00016600 fbxl20,LOC107727724,LOC107666314,LOC107665129,LOC107549884,LOC107563017 coding downstream 401589 25676569 ~ 25703327 (-)
AMCG00016597 NA coding downstream 462583 25611563 ~ 25642333 (-)
AMCG00016594 cacnb1,LOC106600985,LOC103392742 coding downstream 621206 25449909 ~ 25483710 (-)
AMCG00016615 NA coding upstream 34161 26151611 ~ 26155450 (-)
AMCG00016624 LOC107733370 coding upstream 94936 26212386 ~ 26215060 (-)
AMCG00016629 LOC108438403 coding upstream 187465 26304915 ~ 26309363 (-)
AMCG00016628 NA coding upstream 222043 26339493 ~ 26343614 (-)
AMCG00016627 NA coding upstream 255569 26373019 ~ 26374602 (-)
G14650 NA non-coding downstream 5944 26097728 ~ 26098972 (-)
G14585 NA non-coding downstream 82653 25971786 ~ 26022263 (-)
G14587 NA non-coding downstream 125353 25973534 ~ 25979563 (-)
G14578 NA non-coding downstream 183368 25918030 ~ 25921548 (-)
G14517 NA non-coding downstream 429716 25672304 ~ 25675200 (-)
G14723 NA non-coding upstream 157727 26275177 ~ 26303459 (-)
G14765 NA non-coding upstream 277482 26394932 ~ 26395425 (-)
G14775 NA non-coding upstream 307582 26425032 ~ 26425250 (-)
G14818 NA non-coding upstream 313005 26430455 ~ 26468099 (-)
G14832 NA non-coding upstream 405354 26522804 ~ 26523047 (-)
G14637 NA other downstream 21749 26081503 ~ 26083167 (-)
G14534 NA other downstream 350444 25752995 ~ 25754472 (-)
AMCG00016591 NA other downstream 684545 25413316 ~ 25420371 (-)
AMCG00016579 NA other downstream 827438 25264772 ~ 25277478 (-)
G14392 NA other downstream 1021217 25080568 ~ 25083699 (-)
AMCG00016617 NA other upstream 30060 26147510 ~ 26149543 (-)
AMCG00016616 sp6,LOC102212756,LOC101463567,LOC100707362,LOC107396441,LOC106564946,LOC103384358 other upstream 39071 26156521 ~ 26159922 (-)
G14676 NA other upstream 64294 26181744 ~ 26184778 (-)
AMCG00016623 NA other upstream 121632 26239082 ~ 26241390 (-)
G14816 LOC108438405,LOC108438407,LOC107666325,LOC107563033,LOC107666324,LOC107753907 other upstream 309889 26427339 ~ 26520397 (-)

Expression


Co-expression Network