AMCG00016634


Basic Information

Item Value
gene id AMCG00016634
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 26442159 ~ 26446820 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016634
ATGTCCTACTCTGCCAGAAGCTCCTactcctcctccaggatgggCTCAGGAGGCCAGCTGCTCCGAGGGAGCCCAAGCATGCTGACAGCCAGCAAGTCCATGAGTGTGTTCGGGGAGGCCGGGGGCTACGGGGCCCGCATCTCCTCCGCCAGCTCGGCCAACAGCAGCCTAACCCAGAGGCCTGTCCACACAGAGAGCCGGCTCCCCAGATCCGGGCCCAGAAACTCTGGACATTGTCTGGTCTCTGCACTGCTCCTCTCGGCTCAATCTCGAATGCAATCAGACAAAGAGTTGGCCACCATGCAGACTCATCTGAGTGGGCAGGTCAATGTGGCTGTTGATGCGGCGCCTGGGGTTGACCTGACTAGCACCATGGCCGAGATCCGGGAGCAGTACGAAGCTGCAGCCACCAAGAATCACCGAGAGCTGGAGGCCTGGTACCAAACGCAGGCCACCACTGTGCAGGAGGAGGTGACCCTGCAGAATGAGGCGATGCAGACCACCAGCGTGGAGTTCAAGGAGCTGAAGAGCAGAGTCCAGAACCTGCAGATTGAGCTGCAGTCCTGCCACAGCATGAAAGCATCGTTGGAGGTGAGCCTGGCAGAGACGCAGGCACGGTACTCCGCTCAGCTTTCCAACCAGCAGGCCAAGGTCAGCTCCCTGGAGGCCCAGCTTAGCCAGCTGCGTGCCGCCATCGAGGAGGAGGGGGCCCGGTACCGCACACTGCTGGACATCAAGATTCAGCTGGAGATGGAGATTGCAGAGTACCGCCGCCTGCTGGATGGGGAGGACCTCAGcaGCACAGCTACAAGCCACACAGAAGCCACCAAATCTACCACAACAAGAGTGGTGACCATTGTGGAAGAGACGGTGGATGGGAAAGTGGTAAAAACCTCCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016634 True 900 mRNA 0.60 7 26442159 26446820

Neighbor

gene id symbol gene type direction distance location
AMCG00016630 eif1b,LOC105888686,LOC107549864,LOC103043673 coding downstream 60430 26380048 ~ 26381729 (-)
AMCG00016627 NA coding downstream 67557 26373019 ~ 26374602 (-)
AMCG00016628 NA coding downstream 98545 26339493 ~ 26343614 (-)
AMCG00016629 LOC108438403 coding downstream 132796 26304915 ~ 26309363 (-)
AMCG00016624 LOC107733370 coding downstream 227099 26212386 ~ 26215060 (-)
AMCG00016645 NA coding upstream 208768 26655588 ~ 26660740 (-)
AMCG00016642 NA coding upstream 215266 26662086 ~ 26664301 (-)
AMCG00016649 NA coding upstream 274967 26721787 ~ 26732090 (-)
AMCG00016648 NA coding upstream 296764 26743584 ~ 26749062 (-)
AMCG00016651 tbkbp1 coding upstream 369988 26816808 ~ 26822326 (-)
G14775 NA non-coding downstream 16909 26425032 ~ 26425250 (-)
G14765 NA non-coding downstream 46734 26394932 ~ 26395425 (-)
G14723 NA non-coding downstream 138700 26275177 ~ 26303459 (-)
G14650 NA non-coding downstream 343187 26097728 ~ 26098972 (-)
G14585 NA non-coding downstream 419896 25971786 ~ 26022263 (-)
G14832 NA non-coding upstream 75984 26522804 ~ 26523047 (-)
G14882 NA non-coding upstream 294265 26741085 ~ 26742338 (-)
G14943 nfe2l1,nfe2l1b,LOC107565927 non-coding upstream 532338 26979158 ~ 26983486 (-)
G14999 NA non-coding upstream 797146 27243966 ~ 27245247 (-)
G15001 hoxb5a,LOC104941372,LOC103365501,LOC108278507,LOC108413114 non-coding upstream 816893 27263713 ~ 27265603 (-)
AMCG00016623 NA other downstream 200769 26239082 ~ 26241390 (-)
G14676 NA other downstream 257381 26181744 ~ 26184778 (-)
AMCG00016616 sp6,LOC102212756,LOC101463567,LOC100707362,LOC107396441,LOC106564946,LOC103384358 other downstream 282237 26156521 ~ 26159922 (-)
AMCG00016617 NA other downstream 292616 26147510 ~ 26149543 (-)
G14637 NA other downstream 358992 26081503 ~ 26083167 (-)
G14843 NA other upstream 121849 26568669 ~ 26571641 (-)
AMCG00016643 NA other upstream 135706 26582526 ~ 26592300 (-)
AMCG00016644 NA other upstream 179887 26626707 ~ 26643493 (-)
AMCG00016662 cbx1,cbx1b,LOC108279860 other upstream 548353 26995173 ~ 27003707 (-)
AMCG00016671 hoxb6ab,hoxb6,hoxb6a,LOC105013254,LOC103045875,LOC107582892 other upstream 819067 27265887 ~ 27279334 (-)

Expression


Co-expression Network