AMCG00016642


Basic Information

Item Value
gene id AMCG00016642
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 26662086 ~ 26664301 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016642
GTAGCTGCTGCAGGACTGTCGTGTGCCGGGCCAAGCAATGGCAGCTCTCTGTGCGGCTCTCCTCTTGGTGCTGCTTGTGTGCGTGGGGGGGCAGTCGACCCCGGGCTCCTGCCGCATCTCCTGTGACCCTCTCCTCACTCGGGATGGCACGGTCACCGGCTTGGAGCAAGGGCTGGTCATCCCCCTGTCCACAGCGCCCACTGGACCCCCGGGCAAGATGGGTCCCCCAGGGAAGGCAGGGCCCCGTGGTCTGCCAGGCATAGCGGGGGTCCCTGGGCCACCGGGAAGTCCCGGGAGAACAAGAGGCTCCAAAATCGCCTTCTACGCATCACTCACCGGCGCCTTCAAAGACCAGGATGTTCTGAGGTTCACGGACGTGGTGACCAACCTGGGCGACAGCTACGACCCCGGCACCGGAGTGTTCACCTGCAGGGTGTCCGGCACCTACGCCTTCAGCTACCACATCCTGAAGGAGGGAGGAGACATGTGGGCCGACCTGCTGCTCAACGACCAGGTGCACGCCAGCTCCATTGCCCAGGACGCCAACCGGAAGTTTGACTATGCGGCCAACAGCGTGGTCCTGCAGTTGCAGGTGGGGGACAGGGTCTGTGTGAAGCTGGACGGTGGGCAGGTCATGGAGGACTCAGCTGGGGGGCGGTACAGCACGTTCTCCGGCTTCCTGCTGTTCGAGGACTGAGTCCAGAGAGCTCGGCCTGCACAGAGCGACTCCAGTGCAGCCAGGCCTCCCTCCCCTGAGCCTTTCCTCCCCTCCCTCGGTGTAACTGTGTTTCACAGGACAGAGCGAGATCCTGGTCCCAAATCTTCAGAGCTGGTCAAGAGTTTCCTAACTCATAAGAGAGGGCAGTGCGTGAGGGTTTAACAAAGTGACTGTGTTGCACTGACAGTTTATCTTCTCACTCAGAATGACTGGGggagtgtaataataatagagaaaaATTATCAACACAGACATTTTATAGATGAAGTAGTTTAGCAGCCAAGGAGCCCCCGGCGCGTGTAGTGGCTGCAGGGCTCGGAGTGAAGGCTGTGCTCTCCAGGAGAACGAAGAGAGCAGCCTTGCTGCAGCCGCCTGCTCCGGCCGATCACTTTTCAACCCCACAGCGCTGCACATGCAAGGTTTCTTATTTGCAGTTGAAGCAGAAGCAGGGGTGTGGGGACTTTACGTGCAGGACAGTGCTGATTTAACAATGACTACTTAGCTGCTGGTTGCACTGAAAGACCTGATCCATCCTGTGCCGCTCATGTAtgatcaataaaacaataaaagaaaatttACTCTTGAAAGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016642 True 1309 mRNA 0.58 2 26662086 26664301

Neighbor

gene id symbol gene type direction distance location
AMCG00016645 NA coding downstream 1346 26655588 ~ 26660740 (-)
AMCG00016634 NA coding downstream 215266 26442159 ~ 26446820 (-)
AMCG00016630 eif1b,LOC105888686,LOC107549864,LOC103043673 coding downstream 280357 26380048 ~ 26381729 (-)
AMCG00016627 NA coding downstream 287484 26373019 ~ 26374602 (-)
AMCG00016628 NA coding downstream 318472 26339493 ~ 26343614 (-)
AMCG00016649 NA coding upstream 57486 26721787 ~ 26732090 (-)
AMCG00016648 NA coding upstream 79283 26743584 ~ 26749062 (-)
AMCG00016651 tbkbp1 coding upstream 152507 26816808 ~ 26822326 (-)
AMCG00016653 NA coding upstream 168893 26833194 ~ 26839113 (-)
AMCG00016652 NA coding upstream 208594 26872895 ~ 26886881 (-)
G14832 NA non-coding downstream 139039 26522804 ~ 26523047 (-)
G14818 NA non-coding downstream 193987 26430455 ~ 26468099 (-)
G14775 NA non-coding downstream 236836 26425032 ~ 26425250 (-)
G14765 NA non-coding downstream 266661 26394932 ~ 26395425 (-)
G14723 NA non-coding downstream 358627 26275177 ~ 26303459 (-)
G14882 NA non-coding upstream 76784 26741085 ~ 26742338 (-)
G14943 nfe2l1,nfe2l1b,LOC107565927 non-coding upstream 314857 26979158 ~ 26983486 (-)
G14999 NA non-coding upstream 579665 27243966 ~ 27245247 (-)
G15001 hoxb5a,LOC104941372,LOC103365501,LOC108278507,LOC108413114 non-coding upstream 599412 27263713 ~ 27265603 (-)
G15016 hoxb9 non-coding upstream 631784 27296085 ~ 27308958 (-)
AMCG00016644 NA other downstream 18593 26626707 ~ 26643493 (-)
AMCG00016643 NA other downstream 69786 26582526 ~ 26592300 (-)
G14843 NA other downstream 90445 26568669 ~ 26571641 (-)
G14816 LOC108438405,LOC108438407,LOC107666325,LOC107563033,LOC107666324,LOC107753907 other downstream 141689 26427339 ~ 26520397 (-)
AMCG00016623 NA other downstream 420696 26239082 ~ 26241390 (-)
AMCG00016662 cbx1,cbx1b,LOC108279860 other upstream 330872 26995173 ~ 27003707 (-)
AMCG00016671 hoxb6ab,hoxb6,hoxb6a,LOC105013254,LOC103045875,LOC107582892 other upstream 601586 27265887 ~ 27279334 (-)
G15026 NA other upstream 705289 27369590 ~ 27370139 (-)
G15067 NA other upstream 737375 27401676 ~ 27403922 (-)
G15076 NA other upstream 760592 27424893 ~ 27428651 (-)

Expression


Co-expression Network