AMCG00016645


Basic Information

Item Value
gene id AMCG00016645
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 26655588 ~ 26660740 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016645
ATGCAGGGTCGAGTACTGCTGCTGGGGCTGGATGCTGCGGGCAAAACCACCCTGCTGTATAAGCTGAAGCTGGGCGAGGTGGTCAGCACTATCCCCACTGTGGGCTTCAATGTGGAGACGGTGGAGCCGGCAGCTGGGGTGTCCTTTGTGGTGTGGGACGTGGGGGGCCAGGACAAGATCCGGGCGCTGTGGCGGCACTACTACCAGAACGCGGAGGGACTGCTGTTTGTGGTGGACAGCGTGGATACCCAGCGCTTCCTAGAGGCCCAGGAGGAGTTGGATGCCATCCTGTCCCACGTGGAGATGAGAGACGTGCCCGTGGTGCTGCTCGCCAACAAGCAGGACCTGCCGGGGGCGCGTGGCCCGGGCGAAGTGGCAGAGGCACTGGGGCTGCACAAGAGGAGAGACAACCCCTGGCATGCGCAGGGCTGCTACACTGCGCTGAAGATGGTTCTCCTGGCTTTAGGGACTCTGCACCTGCTCCTGCAGCCGACTCCTCTCAGGACGAGGAGACATCTGGCGGGTCGAGCACAGGAGAGCCGAGCAGAGGAAGCAGAGCTGAGAAGCAGTGCAGTCCCCATGTGGGGTGTGATGCCACCGGGCGGGCTGTGGGTGGTTTGCATGCTGGCGCTGGCCGCCCTGTGCCTGACGGAGGAGGCCATCCGCTGTCCACCCTGCTCCGAGGAGCGCCTGGCTCGCTGCAAGCAGCCGCCGGGCTGTGAGGAGACGGTGCGCGAGCCGGGCTGTGGGTGCTGCCCCACCTGCGCCCTGGCCAAGGGCATGTACTGCGGAGTGTACTCGCCCCGCTGCGGCTCCGGCCTGCGCTGCTACCCCCCGCGAGGCGTGGATAAGCCCCTGCACTCTCTCATGCATGGCCAGGGTATCTGCACCGACGAGAGGGAGGTGGAGCAGCTCATAGGCCTCTCGGGAGTATGGCATATGGCTTCTTACGCCAGGTCAGGGGAGTCTTCCTGCAGTGGCAATCTTCCCGCTGGTGCGATCCGAACGGGGACTGTGGGTGACCTTGGGCAACACttgcacacagcacagaaacTGCCCAGTCCCAGTGCCACAGTCTTCCAGGGTCAGCGAGTGCAGGCAGTCGTAGTCTGGTTTCTAGTGAGAGAGGCGCTGTCCTCCAGTGCATGA

Function

GO:

id name namespace
GO:0000166 nucleotide binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016645 True 1149 mRNA 0.64 4 26655588 26660740

Neighbor

gene id symbol gene type direction distance location
AMCG00016634 NA coding downstream 208768 26442159 ~ 26446820 (-)
AMCG00016630 eif1b,LOC105888686,LOC107549864,LOC103043673 coding downstream 273859 26380048 ~ 26381729 (-)
AMCG00016627 NA coding downstream 280986 26373019 ~ 26374602 (-)
AMCG00016628 NA coding downstream 311974 26339493 ~ 26343614 (-)
AMCG00016629 LOC108438403 coding downstream 346225 26304915 ~ 26309363 (-)
AMCG00016642 NA coding upstream 1346 26662086 ~ 26664301 (-)
AMCG00016649 NA coding upstream 61047 26721787 ~ 26732090 (-)
AMCG00016648 NA coding upstream 82844 26743584 ~ 26749062 (-)
AMCG00016651 tbkbp1 coding upstream 156068 26816808 ~ 26822326 (-)
AMCG00016653 NA coding upstream 172454 26833194 ~ 26839113 (-)
G14832 NA non-coding downstream 132541 26522804 ~ 26523047 (-)
G14818 NA non-coding downstream 187489 26430455 ~ 26468099 (-)
G14775 NA non-coding downstream 230338 26425032 ~ 26425250 (-)
G14765 NA non-coding downstream 260163 26394932 ~ 26395425 (-)
G14723 NA non-coding downstream 352129 26275177 ~ 26303459 (-)
G14882 NA non-coding upstream 80345 26741085 ~ 26742338 (-)
G14943 nfe2l1,nfe2l1b,LOC107565927 non-coding upstream 318418 26979158 ~ 26983486 (-)
G14999 NA non-coding upstream 583226 27243966 ~ 27245247 (-)
G15001 hoxb5a,LOC104941372,LOC103365501,LOC108278507,LOC108413114 non-coding upstream 602973 27263713 ~ 27265603 (-)
G15016 hoxb9 non-coding upstream 635345 27296085 ~ 27308958 (-)
AMCG00016644 NA other downstream 12095 26626707 ~ 26643493 (-)
AMCG00016643 NA other downstream 63288 26582526 ~ 26592300 (-)
G14843 NA other downstream 83947 26568669 ~ 26571641 (-)
G14816 LOC108438405,LOC108438407,LOC107666325,LOC107563033,LOC107666324,LOC107753907 other downstream 135191 26427339 ~ 26520397 (-)
AMCG00016623 NA other downstream 414198 26239082 ~ 26241390 (-)
AMCG00016662 cbx1,cbx1b,LOC108279860 other upstream 334433 26995173 ~ 27003707 (-)
AMCG00016671 hoxb6ab,hoxb6,hoxb6a,LOC105013254,LOC103045875,LOC107582892 other upstream 605147 27265887 ~ 27279334 (-)
G15026 NA other upstream 708850 27369590 ~ 27370139 (-)
G15067 NA other upstream 740936 27401676 ~ 27403922 (-)
G15076 NA other upstream 764153 27424893 ~ 27428651 (-)

Expression


Co-expression Network