AMCG00016648


Basic Information

Item Value
gene id AMCG00016648
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 26743584 ~ 26749062 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016648
ATGAAATCACCACCCACTGCTTCTGTGCAGCGCTGGGCTGACGCAGGTGTTGTTGCCCAGAACTGCCCCAGTGCTGCAGACTCGGCGAGCGGGGCGGCTATATTTAATGGCTGGGACATTCGATCCTGTAGATGTGTTCTGCAGCTGCCCAGGTGTTTGAGTCTCACCCGAGCAGACCGTAACTCGGCTATTTCTGGAGTGTCAGTAGTGCTGCCCAGCCTGCAGCAGCTGGGCTTGTTTGTCTCACGTATTGGGGCTCGAGGGCGGCAGGAGGCTGTAAAGTGGGGCTGTTCAATTCATAGGGAGAACCCCGGACAGCATGGCAGAGCCTGGCAGCTGGCTTGTGACTGCAGGAGGATGTTTCCCTTCCTGAGCTTCAACATCACTGGGCTGGAGCCCACTGCCCACTACAACGTGTACGTCGACGTCATCCTGGCTGACCACCATCACTGGAGATACCAGGGCGGCAAGTGGGTCCAGTGTGGCAAGGCAGAGGGCAACATGCCAGGCAACAGGATGTACATGCACCCAGACTCGCCCAACTCCGGCGCTCACTGGATGAGGCAAGAGGTCTCCTTTGGGAAACTGAAACTCACCAACAACAAGGGCAGCTCCAACAACGTGGCACAGATGATCGTGCTGCAGTCTCTGCACAAGTACCAGCCCCGGCTGCACATTGTGGAGGTGAAGGAGGATGGCAGTGAGGATCCCTACCTGACCGCCAAGGCCCAGAGCTTCGTGTTCCCTGAGACGCAGTTCATCGCTGTCACCGCGTACCAGAATGCAGACGTGAGTACCAGCCACATACCTGCCCTGTACCCACCCCATACCTGCCCCGTAACCGTTCCGATCTATGCCCCCCAGGAGACAGACCGGCTCACCCCCTCGCCCATCGACGGGCCGCAGTTGCTATCAGGGAACTGCTACCAGCCCTACCTGCCAGAGCAGTACATGGGCACGCTTCCCCAGGGCCGCTTCTTCGGGCGCGAGCGCGCGGGCATGGGGCATGCCGGTCACCAGACCCACCAGGGGCTGGCTGCACACCCGGGGCAGCCCAAGGAGCCCGGCAGCAGCCCGCACGGCCGCTGGTACCTGCCCGGCCAGCAGGGGGCGAGTGCAAACCGCCTGGAATTCAACTCCTATGACTCCGACTTCTCTGGCAACGGCTTCATGTCCTACAAGCCGTTCCCCATCCAGACGGCCGCCCACCACCCGCTGGGCTACTACCCGGACCACCCCTTCGGCCCTGGGGCCGTGTCCACAGCCGCCGCTGCGGGGGGCTGGGGGCCCAGCCGCCCCTCCGCACCGTACCTCaacgccccccacccccacccgcACCCTAAAAGCAGTCCCAGCCTGAGCTGGTTCCGCCccatgacctctgacccccGGCTGCACCACTCCATAGTCCCGGAGCTGCAGCAGAACCCGCCCCTGCCCCCTCTGCCCCCACCTCCGCTGCAGGACAAGCCTAAGGAGCCGGGCCCCGGGGAGGACTCCTGGCTGGAGCCGCCGTCGGTGAAGTCGGTGGACTCGGCCGACTCGGGGCTGTACGAGGGAAGTGCCGAGAGCAAGAAAAGGAGGGTGTCGCCCTACGCCTCCAGTACGGAGAGCTCGCCGCCCAACCGGAGCGCAGACACCTGCGAGAAGGACAGCGGCAGCGACGCCGGGTACTACGGCTTTTACACCAACTga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016648 True 1695 mRNA 0.64 6 26743584 26749062

Neighbor

gene id symbol gene type direction distance location
AMCG00016649 NA coding downstream 11494 26721787 ~ 26732090 (-)
AMCG00016642 NA coding downstream 79283 26662086 ~ 26664301 (-)
AMCG00016645 NA coding downstream 82844 26655588 ~ 26660740 (-)
AMCG00016634 NA coding downstream 296764 26442159 ~ 26446820 (-)
AMCG00016630 eif1b,LOC105888686,LOC107549864,LOC103043673 coding downstream 361855 26380048 ~ 26381729 (-)
AMCG00016651 tbkbp1 coding upstream 67746 26816808 ~ 26822326 (-)
AMCG00016653 NA coding upstream 84132 26833194 ~ 26839113 (-)
AMCG00016652 NA coding upstream 123833 26872895 ~ 26886881 (-)
AMCG00016657 NA coding upstream 139272 26888334 ~ 26891932 (-)
AMCG00016659 NA coding upstream 152314 26901376 ~ 26901744 (-)
G14882 NA non-coding downstream 1246 26741085 ~ 26742338 (-)
G14832 NA non-coding downstream 220537 26522804 ~ 26523047 (-)
G14818 NA non-coding downstream 275485 26430455 ~ 26468099 (-)
G14775 NA non-coding downstream 318334 26425032 ~ 26425250 (-)
G14765 NA non-coding downstream 348159 26394932 ~ 26395425 (-)
G14943 nfe2l1,nfe2l1b,LOC107565927 non-coding upstream 230096 26979158 ~ 26983486 (-)
G14999 NA non-coding upstream 494904 27243966 ~ 27245247 (-)
G15001 hoxb5a,LOC104941372,LOC103365501,LOC108278507,LOC108413114 non-coding upstream 514651 27263713 ~ 27265603 (-)
G15016 hoxb9 non-coding upstream 547023 27296085 ~ 27308958 (-)
G15066 NA non-coding upstream 646057 27395119 ~ 27398583 (-)
AMCG00016644 NA other downstream 100091 26626707 ~ 26643493 (-)
AMCG00016643 NA other downstream 151284 26582526 ~ 26592300 (-)
G14843 NA other downstream 171943 26568669 ~ 26571641 (-)
G14816 LOC108438405,LOC108438407,LOC107666325,LOC107563033,LOC107666324,LOC107753907 other downstream 223187 26427339 ~ 26520397 (-)
AMCG00016623 NA other downstream 502194 26239082 ~ 26241390 (-)
AMCG00016662 cbx1,cbx1b,LOC108279860 other upstream 246111 26995173 ~ 27003707 (-)
AMCG00016671 hoxb6ab,hoxb6,hoxb6a,LOC105013254,LOC103045875,LOC107582892 other upstream 516825 27265887 ~ 27279334 (-)
G15026 NA other upstream 620528 27369590 ~ 27370139 (-)
G15067 NA other upstream 652614 27401676 ~ 27403922 (-)
G15076 NA other upstream 675831 27424893 ~ 27428651 (-)

Expression


Co-expression Network