AMCG00016653


Basic Information

Item Value
gene id AMCG00016653
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 26833194 ~ 26839113 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016653
atggagaaggtTTTTGTTTGGAACAGGCTGGGCACAGGAAGTCACAATCTGAGGCTCCCCACTCTGCCTCCCAGCATGCACCGCTGTGGTCCTACTCCCCAGAAAGGGTCCGGTGGGGAGTGGGGGTGCAGACAAGTCCCCATCACCCCCCTACTTGGTGCAAAGAGGAATgCTGGCAGTGAGTCAGAGACAGCAAGCAAACGAAGAAGTGAGGGGATGGAGTCTCTCTTTGGAGGCGAGCTGGGGCTGCTCGGGGGGGAGGGGTTGAAGGAGGACGGGTGTGGGGTGGGCTGGCCGGGCGCCCCCCTGCCCGACGACATGTATTCCGCCTCGCACTTTGCCCTCATCACCGCGTACCATGACATCAAGACACGGCTGGCCAGCCTGGAACGAGAAAACAGCGGCCTGAAGAGGAAACTCAAGATCTATGAGATCAAGTCGGTGTCTGCTCCCTCTGCCAGCGTGGTGCAGGGGTTTCTCTGTAACCCGCTGTGTCAGGCCCTGTCTCTTTGGCGGTGGCTGCCCAGTCGTCTGGCCCCTGTGGAGCTGGGTTTTGCGTTTCCCATGATCGGCGACTTCGGGGAAGATCGTAACTCCTACTGCTCCTTCGAGTCAAAGGAAACGGCGCTGCTCCAGTCTGAGAACGGTAGCCTGCAGCAGCAAGTCAACCAGTTGACCCGAGAGACCACGCTAGCAGAGAAGCATGTGGAACGGATCCGGGGGCTGGAGGCGGCACTGCGCCAGAGGGACACACACCGCTGCATCATGTCACGCCCCCGGCTCTCGTCTGTGCAGCCTCCTCCGCAGATGCCCAACTTGGCATCCCGCCCCCCTGCACTCATCTGCACAGCCTCCTTCGCAGATCCCCCAGCTCTTCAGAGTGTCTTCAGAGGAACAGCCTGTGTCCTCAAAGCCTACCCCCCCACCGGCCATTGCCAGGTGGAGATACTGCCAACGCTGCTGCTGTTCCATTCCGTGAGCTCACGCAGCCTGGACACCCTGTCTGACCTGAAGCTGCAGCGGCTGGAGGCGGAGCTAGAGGGGGCGCGGCACGAGGTGCAGGGGGCGTGTCGGCGGGAGGCGGGGCTGAAGGCGGACACAGCCAAAACACACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016653 True 1116 mRNA 0.62 9 26833194 26839113

Neighbor

gene id symbol gene type direction distance location
AMCG00016651 tbkbp1 coding downstream 10868 26816808 ~ 26822326 (-)
AMCG00016648 NA coding downstream 84132 26743584 ~ 26749062 (-)
AMCG00016649 NA coding downstream 101104 26721787 ~ 26732090 (-)
AMCG00016642 NA coding downstream 168893 26662086 ~ 26664301 (-)
AMCG00016645 NA coding downstream 172454 26655588 ~ 26660740 (-)
AMCG00016652 NA coding upstream 33782 26872895 ~ 26886881 (-)
AMCG00016657 NA coding upstream 49221 26888334 ~ 26891932 (-)
AMCG00016659 NA coding upstream 62263 26901376 ~ 26901744 (-)
AMCG00016656 LOC107677865 coding upstream 101867 26940980 ~ 26946564 (-)
AMCG00016658 copz2,LOC107740614,LOC107662379,LOC107585036,LOC105013247,LOC106607483 coding upstream 128297 26967410 ~ 26974651 (-)
G14882 NA non-coding downstream 90856 26741085 ~ 26742338 (-)
G14832 NA non-coding downstream 310147 26522804 ~ 26523047 (-)
G14818 NA non-coding downstream 365095 26430455 ~ 26468099 (-)
G14775 NA non-coding downstream 407944 26425032 ~ 26425250 (-)
G14765 NA non-coding downstream 437769 26394932 ~ 26395425 (-)
G14943 nfe2l1,nfe2l1b,LOC107565927 non-coding upstream 140045 26979158 ~ 26983486 (-)
G14999 NA non-coding upstream 404853 27243966 ~ 27245247 (-)
G15001 hoxb5a,LOC104941372,LOC103365501,LOC108278507,LOC108413114 non-coding upstream 424600 27263713 ~ 27265603 (-)
G15016 hoxb9 non-coding upstream 456972 27296085 ~ 27308958 (-)
G15066 NA non-coding upstream 556006 27395119 ~ 27398583 (-)
AMCG00016644 NA other downstream 189701 26626707 ~ 26643493 (-)
AMCG00016643 NA other downstream 240894 26582526 ~ 26592300 (-)
G14843 NA other downstream 261553 26568669 ~ 26571641 (-)
G14816 LOC108438405,LOC108438407,LOC107666325,LOC107563033,LOC107666324,LOC107753907 other downstream 312797 26427339 ~ 26520397 (-)
AMCG00016623 NA other downstream 591804 26239082 ~ 26241390 (-)
AMCG00016662 cbx1,cbx1b,LOC108279860 other upstream 156060 26995173 ~ 27003707 (-)
AMCG00016671 hoxb6ab,hoxb6,hoxb6a,LOC105013254,LOC103045875,LOC107582892 other upstream 426774 27265887 ~ 27279334 (-)
G15026 NA other upstream 530477 27369590 ~ 27370139 (-)
G15067 NA other upstream 562563 27401676 ~ 27403922 (-)
G15076 NA other upstream 585780 27424893 ~ 27428651 (-)

Expression


Co-expression Network