AMCG00016654


Basic Information

Item Value
gene id AMCG00016654
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 26893279 ~ 26897534 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016654
ATGATACCGAGTCAGGGGTTGATCCGGGCAATCGGTGGGGTTGTCAGCGGCAGTAAGTCATTCCTCCGTCAACGAGCACTGCAGCGCCTGCTGTCCACAAGCGACTTCCTCACCGGCTGCCCTTGTCTTCGCACGAAACACACAGCCTCGGAAATGGACCTGAGCGACATGAGGAAGAGTTACAAAGCAGACGAGGAGGCCTTCGAGGAGAAGCACCTGGTTTCTCTCGATCCCATTAAGCAGTTTGAGGACTGGTTCAACCAGGCCACCAAGTGCCCTGCCATCGGGGAGGCCAATGCCATGTGTCTGGCCACCTGCTCAAAAGATGGCCGCCCGTCTGCACGCATGGTGCTGCTGAAGGGCTACAGTGACGAGGGCTTCCGCTTCTTCACCAACACGGAGAGCCGCAAGGGCGCTGAGCTGGCGTGCAATCCTTTCGCATCTCTCGTGTTCTACTGGGAGCCCTTGAACAGACAGGAGAAAGCGGAGGGGTACTTTCATTCGCGGCCCAAGAGCAGCCAGATTGGTGCCGTGGTGAGCCGACAGAGCACCGTCATCCCCAGCAGAGAGTACCTGAGGCAGAAGAACGCCGAGGTGGAGGAGAAGTTCAGAGACTCGGCTGTCCCCATGCCCGACTACTGGGGCGGCTACGTCCTGCGGCCCGAGGTGATCGAGTTCTGGCAGGGTCAGACCAACCGGCTCCACGACCGCATCGTGTTCCGGCGTCCGGCGGAGGGAGATGCTGTGGACGTGGATGGCGTCGCACAGCGCAAAGGGGAAGGCAACTGGATTTTCCAGAGGCTGTCGCCGTGAACAGGGGGGAGGGATCTCCATCCGCAAAGTCTGGTTGGATGATGGCCCAGCTGTGCCTGCTTGAGCTGCAGTTGTTCCTCAGGCCTCTtgaatgagagaaagaaagggttTGGGCACTTCTGCACTAGCTGACACTGTGTCATTTCTGCCCAAGAGCCGACACACAAACGGCAGGACAGCAGGCATGATGGCACCATGTCCTGCATTCGTACAATCCCGCACTAGGGACCCCGCGTGTCACAACAGTGATGTCTTTCATTGTAACGTATGTGattctgtttgtgtctgaaaTGGCAGTTTGTGACGGTGACACATGTTCACTGCTGTCCGAGGACTCAGTCTCctcatttgatttttttgtttgtttgttttcctcctggTTCTTTTTAACAAACATTGAGTAGGACTTGTGGAGGTGtgcaataataaattacatttgtgacTCCTAAGTGGTGCAGT

Function

GO:

id name namespace
GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors molecular_function

KEGG:

id description
K00275 pdxH, PNPO; pyridoxamine 5'-phosphate oxidase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016654 True 1272 mRNA 0.56 8 26893279 26897534

Neighbor

gene id symbol gene type direction distance location
AMCG00016650 NA coding upstream 24098 26857718 ~ 26869181 (+)
AMCG00016647 NA coding upstream 193078 26683642 ~ 26700201 (+)
AMCG00016636 NA coding upstream 225599 26665445 ~ 26667680 (+)
AMCG00016646 NA coding upstream 309613 26583454 ~ 26583666 (+)
AMCG00016637 NA coding upstream 320922 26559807 ~ 26572357 (+)
AMCG00016655 NA coding downstream 14434 26911968 ~ 26918768 (+)
AMCG00016661 nfe2l1 coding downstream 79661 26977195 ~ 26990313 (+)
AMCG00016660 NA coding downstream 101733 26999267 ~ 27009741 (+)
AMCG00016668 NA coding downstream 461244 27358778 ~ 27364948 (+)
AMCG00016677 NA coding downstream 496424 27393958 ~ 27403922 (+)
G14803 NA non-coding upstream 177478 26715569 ~ 26715801 (+)
G14802 NA non-coding upstream 180150 26712231 ~ 26713129 (+)
G14800 NA non-coding upstream 188075 26704997 ~ 26705204 (+)
G14791 NA non-coding upstream 235961 26589606 ~ 26657318 (+)
G14992 NA non-coding downstream 365356 27262890 ~ 27274297 (+)
G15005 hoxb7a,hxb7a,hoxb7,hoxb7ab non-coding downstream 383890 27281424 ~ 27282569 (+)
G15025 NA non-coding downstream 472055 27369589 ~ 27370138 (+)
G15224 NA non-coding downstream 1219384 28116918 ~ 28117190 (+)
G15226 NA non-coding downstream 1221009 28118543 ~ 28119649 (+)
AMCG00016635 NA other upstream 235854 26600093 ~ 26657425 (+)
AMCG00016638 krt222 other upstream 345067 26527319 ~ 26548212 (+)
AMCG00016640 NA other upstream 394037 26489938 ~ 26499242 (+)
AMCG00016633 NA other upstream 459623 26427339 ~ 26433656 (+)
AMCG00016625 mllt10,LOC106942732 other upstream 590765 26285802 ~ 26302514 (+)
AMCG00016663 NA other downstream 68763 26966297 ~ 26993948 (+)
AMCG00016683 NA other downstream 644952 27542486 ~ 27553120 (+)
AMCG00016691 NA other downstream 690945 27588479 ~ 27604879 (+)
AMCG00016690 NA other downstream 715571 27613105 ~ 27626090 (+)
AMCG00016699 LOC106607176 other downstream 879893 27777427 ~ 27799126 (+)

Expression


Co-expression Network