AMCG00016655


Basic Information

Item Value
gene id AMCG00016655
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 26911968 ~ 26918768 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016655
GCGTTTCCTCCGGGGTCCAGCTCTGGCGCTCTGATTGGTCCACCGACCCGTGTAGTGACGTGTCGGTGTAAACACGCTTTCTGGGCTCATTACGCTAGAATATCCAGATGgtctgattaattaaaaacgtAAAGAGAGACATTATTACAGTTGCGATGGAGaAGTATCAGAACCTCCCCATCGACATCCAGACCAGCAAGCTGCTGGACTGGCTGGTGGACCGGCGGCACTGTGGGTTGCAGTGGCAGGGCGCGGCCCAGGAGGTGCGGGAGAAGATCACAGCAGCCATGCAGGACATGCCTGAGAACCAAGAGATCAAGGAGCTGCTGTCTGGGGCCTACATCCATTATTTCCACTGCCTGAGGATAGTGGAGATCCTCAGGGGCACCGAGGCCTCCTCGAAGAACATATTTGGCAGGTACTCCTCCCAAAGGATGAAGGACTGGCAGGAGATTGTGTCCCTCTACGAGAAAGACAACGTGTATCTGGCGGAGCTGGCCAGTCTGTTGGTGCGCAGTGTGAGCTACGAGGCGCCCGCGCTGCGCAGACAGCTGTCTAAGGTGCAGCAGCTTCAGCAGGAGCTAAGCCGCCGGGAGGTGGACTGCCAGAGCACTGCTGCCGAGCTGAGGGAGAAATACTACAGCTCCTGCAGGCAGTACGGCATCACGGGAGACAATGTGAAGTGGGAGCTGCAGGCGTTAGTCCGGGAGCTGCCAGCTGTGCTGGAGGAGCTGGGCAGGGAGGCGTACAGCCTGGAGAGGCCAATACAGCTCTACTCTGCCTTCACTCGCTTCGTCTGCGATTGgtctgACCCTGTGCTGCCCATGCTCAGTTTCTGTCAGAGCCGAGGGAACATCACTGTGTATGAGTGGAGGACAGGGACCCCCCCCATCGTCACCGAGAGACCCCCCGAGGAGGAACCGCCCCCCGACACCGTCACTGCAGAGACGATCGACTGGGGAGACCTGGGCAGTGGTGAGGGGGATGGTGTGGACTACGGGGTCACTGCGGAGGACGGAGTGGACTGGGGTATCAGCCTGGAACCCACTGCTGAGgaGGCTGGTTCAGAAGGCATAGACTTGGGAGAGGAGCTGCTCAATCCAGTTGAAATTGAAGTGGTGGAGATGGGCACTGACTGCCCAGCTGGGGTGGCACGGGGGGAGGATGCTCTGTCTCTCCTGGAGAATCCCCAGACTCGTGGACAGTTCATTGACGAGCTCATGGAGCTGGAGCTTTTCCTGGCTCAGAGGCAGGTGGAGCAGGGTGAGGAGGAGGATGTTCTGGCCATGAGCCAGTTCCAGCAGGCCCCCCCCATCATCCAGAGCCAGACGCGGGACAAGGTGGGCTCCATGTTGGCCCAGGTGCGATCTCTACTCAAGCGGCTCACCAACCTGCGCATGCAGCACCTCTTCATGATCCAGGCCTCCCCACGCTATGTGGAGCGTGTGTCAGAGGTGCTGGGGCAGAAGCTGAAGCAGTCTGAGCTGatTGAAACCGACATCTCCAAACGGTACAACAACCGTCCCGTGAACCTGATGGGTGTCACTGTGTAGCTGCACCAGACCGCCCGTCCACCGCAGGGCCACACTGCCGCCCCTCGCTGTTAATAAATTATTCTATTTTGACTAAAGCCTTTTGCGCATcaccattatttttattattattattatggacaCAGTCTTccttttggtttagtttttttctgttttgctttctcCACCTGTTAACATGAGAATTAATCTGATAGTTTACTGGCTTgcttggtttatttgtttttccgcccacactttactgcactgtgagTGCCGATTTCCCCCCCACCTCGTc

Function

GO:

id name namespace
GO:0007369 gastrulation biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016655 True 1827 mRNA 0.56 14 26911968 26918768

Neighbor

gene id symbol gene type direction distance location
AMCG00016654 NA coding upstream 14434 26893279 ~ 26897534 (+)
AMCG00016650 NA coding upstream 42787 26857718 ~ 26869181 (+)
AMCG00016647 NA coding upstream 211767 26683642 ~ 26700201 (+)
AMCG00016636 NA coding upstream 244288 26665445 ~ 26667680 (+)
AMCG00016646 NA coding upstream 328302 26583454 ~ 26583666 (+)
AMCG00016661 nfe2l1 coding downstream 58427 26977195 ~ 26990313 (+)
AMCG00016660 NA coding downstream 80499 26999267 ~ 27009741 (+)
AMCG00016668 NA coding downstream 440010 27358778 ~ 27364948 (+)
AMCG00016677 NA coding downstream 475190 27393958 ~ 27403922 (+)
AMCG00016680 NA coding downstream 486640 27405408 ~ 27405728 (+)
G14803 NA non-coding upstream 196167 26715569 ~ 26715801 (+)
G14802 NA non-coding upstream 198839 26712231 ~ 26713129 (+)
G14800 NA non-coding upstream 206764 26704997 ~ 26705204 (+)
G14791 NA non-coding upstream 254650 26589606 ~ 26657318 (+)
G14992 NA non-coding downstream 344122 27262890 ~ 27274297 (+)
G15005 hoxb7a,hxb7a,hoxb7,hoxb7ab non-coding downstream 362656 27281424 ~ 27282569 (+)
G15025 NA non-coding downstream 450821 27369589 ~ 27370138 (+)
G15224 NA non-coding downstream 1198150 28116918 ~ 28117190 (+)
G15226 NA non-coding downstream 1199775 28118543 ~ 28119649 (+)
AMCG00016635 NA other upstream 254543 26600093 ~ 26657425 (+)
AMCG00016638 krt222 other upstream 363756 26527319 ~ 26548212 (+)
AMCG00016640 NA other upstream 412726 26489938 ~ 26499242 (+)
AMCG00016633 NA other upstream 478312 26427339 ~ 26433656 (+)
AMCG00016625 mllt10,LOC106942732 other upstream 609454 26285802 ~ 26302514 (+)
AMCG00016663 NA other downstream 47529 26966297 ~ 26993948 (+)
AMCG00016683 NA other downstream 623718 27542486 ~ 27553120 (+)
AMCG00016691 NA other downstream 669711 27588479 ~ 27604879 (+)
AMCG00016690 NA other downstream 694337 27613105 ~ 27626090 (+)
AMCG00016699 LOC106607176 other downstream 858659 27777427 ~ 27799126 (+)

Expression


Co-expression Network