AMCG00016668


Basic Information

Item Value
gene id AMCG00016668
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 27358778 ~ 27364948 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016668
ATGGAGCCAGCCACAGTGTTGAAAGCGATGGTGGACAACGGCACAGATAACAAGCTGCGTGAAGCCGTGGCCGAGGGCAGAGAGTCTCCGATCGCTATGAATGGTCACGGCGAGGTGGAGCAGGCCGAGGAAGAGCCGTCCCCACGCAGCTCATACCCGGGCGCCGTGGACCAGAGCCGGCGGCACCGCACAGCCTTCACCCGAGAGCAGCTGTCCCGGCTGGAGCAGGAGTACTGCAAAGAGAGCTACGTGTCCCGACCGCGGCGCTGCGAGCTGGCATCGGCGCTGAACCTCCCTGAGACCACCATAAAGGTGTGGTTCCAGAACAGGAGAATGAAGGATAAGAGACAGAGGCACACCCTGAACTGGCCCCACCCCCTGGACCCGGGGCTGTACGCTTACATGATGAGCCAGGCAGCCGCCAGCCTGCCCTACACCTTCCTGCCCCATGTGCCCCTGCACCTGTATTCTCACCTGGGCCTGGGCAGCGGGACCACTGCCCCCAGCCCCTTCGGCACCCCCCTCAGGACCCTCGACCCCTTGCGGCTCTCCCACTCCCCGTACCCCCGGCACGAGATCCTGGCCAGCCTCCCTCAACACGCAATCTACCCCCCCTCCCATGGACTGCACCACCCTGCCGCCTGCCCTTGTCCACTCTGCGTCACCCACCGCGGGCCAGACCATCTCCGGACCCCCAGCTCCAGGGGGACAGATGCCCTTCTCAGCCTGAACCCCTCTCTCAGCCTCAAGACCCCCCCAGTGTCCCTGGACAGGAGAGAGGAGGTGCCTGTGCCTAGATGAAGCTCGAAGAGCCACTCGCTTATGGGGACATTCAACACCGAAAAACATGTCATCAACGACTTCTGAACACATGCCCGGATTAACTCCCTATCGAGCCCAGTTTATCAGTCTCATAAACCCCAAAATGGTGCTGTCCTGTACAGAACACAGACAGTAGAGGTTTTCCACTGTGAAAGAGCATTTGATGGCCAGAGTagtgtatcattttatttattggagtTTCCTTTCCACCTTGCCTcagacaaatgtttttcttttgtaatataTTGCTAGATCTTATATTAtgagaaaagagaagagaagacaGACCTTGGGCTAAATTGCACCTTTTAGGGGTTTATCAAGCCAGGAGACAGAGCAGTAGCAGAAAGTAagattgttctgtgttttttaatgttggtTAACGTGACTGCTCCACAAGTGAACAAGGGCAAGTAAGTGAGGTTGGGTAGGTGGTTAGTGAGGACAGCAGTGCACACTTGTTTCTCTTTGATATGACAGCAGAAAAAGCTTTTACCTCGAGCATGAAAAACCTACAGAATGGTGTTTTGTGTAGGCACTAGAAATGCACGTTTTGGAAAGCAGATAACCGCGCTGAGTGGTGCTGCTGTGTGGCGCATTGTGATGGCACACTCGGATGCTCTGCAAAGTAAAGAACTTTGCTGCACATGTTAAAATAAGATGTGtgtggacaatcgctttctTTGACAGTCGAGAGGGACACGTCCGTCTTCGCTCCAGAATTAATAACTGTGCCAAGATGCTGCAGAGGTTGTAGTTGAGTCTTGCTGTTTGTAAAAGAATATAGGAAAATGTTTTGCCCTTCCAGGAGGAGAAAGGGATTTTATCTGAACTGTCAGATCATGGCTGATAATTGTGGAaaacaagctttaaaaaaaatgtgccttATGTTTCTGTTTCCAACTCTCTGTTGAGCAGATACGCTGGAGAGAAGTGACAAACCTTTGAAAATAGTGTATCTAGAGAAAGTAATGTTGTCCTGATCAtttgtgtctgtttatattatatgtttGGTTCATGTTTTAATTCTGTTCAATTACGATTATTGTAACTAAATTTGCACTACTGGTTCTGTAGAAGATGacaaatgagtgtgtgtgtgtgtgtatatatataaatatgtaaatagttTCACTGCTGTAGGAATAAATGTGGAGTGTGGACTGTACATATTTCCTTTAATTGCTCTGAAttgatttgtaaaaatgttgtgaataaaaaaatatttaagttgA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016668 True 2057 mRNA 0.49 3 27358778 27364948

Neighbor

gene id symbol gene type direction distance location
AMCG00016660 NA coding upstream 349037 26999267 ~ 27009741 (+)
AMCG00016661 nfe2l1 coding upstream 368465 26977195 ~ 26990313 (+)
AMCG00016655 NA coding upstream 440010 26911968 ~ 26918768 (+)
AMCG00016654 NA coding upstream 461244 26893279 ~ 26897534 (+)
AMCG00016650 NA coding upstream 489597 26857718 ~ 26869181 (+)
AMCG00016677 NA coding downstream 29010 27393958 ~ 27403922 (+)
AMCG00016680 NA coding downstream 40460 27405408 ~ 27405728 (+)
AMCG00016676 atp5g1,LOC107740625,LOC106600830 coding downstream 41783 27406731 ~ 27409921 (+)
AMCG00016678 NA coding downstream 49262 27414210 ~ 27416010 (+)
AMCG00016679 NA coding downstream 60732 27425680 ~ 27427034 (+)
G15005 hoxb7a,hxb7a,hoxb7,hoxb7ab non-coding upstream 76209 27281424 ~ 27282569 (+)
G14992 NA non-coding upstream 84481 27262890 ~ 27274297 (+)
G14803 NA non-coding upstream 642977 26715569 ~ 26715801 (+)
G14802 NA non-coding upstream 645649 26712231 ~ 26713129 (+)
G14800 NA non-coding upstream 653574 26704997 ~ 26705204 (+)
G15025 NA non-coding downstream 4641 27369589 ~ 27370138 (+)
G15224 NA non-coding downstream 751970 28116918 ~ 28117190 (+)
G15226 NA non-coding downstream 753595 28118543 ~ 28119649 (+)
G15253 NA non-coding downstream 795717 28160665 ~ 28160887 (+)
G15270 NA non-coding downstream 860894 28225842 ~ 28230979 (+)
AMCG00016663 NA other upstream 364830 26966297 ~ 26993948 (+)
AMCG00016635 NA other upstream 701353 26600093 ~ 26657425 (+)
AMCG00016638 krt222 other upstream 810566 26527319 ~ 26548212 (+)
AMCG00016640 NA other upstream 859536 26489938 ~ 26499242 (+)
AMCG00016633 NA other upstream 925122 26427339 ~ 26433656 (+)
AMCG00016683 NA other downstream 177538 27542486 ~ 27553120 (+)
AMCG00016691 NA other downstream 223531 27588479 ~ 27604879 (+)
AMCG00016690 NA other downstream 248157 27613105 ~ 27626090 (+)
AMCG00016699 LOC106607176 other downstream 412479 27777427 ~ 27799126 (+)
AMCG00016705 NA other downstream 464320 27829268 ~ 27833537 (+)

Expression


Co-expression Network