AMCG00016679


Basic Information

Item Value
gene id AMCG00016679
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 27425680 ~ 27427034 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016679
ATGCTACCCAGCTGCCGGTCTTTCTGGAAGCTTTCTGTACTGAGAGACGTCCCCGAAATTGGTGTCCACATCGGCACGCAGCCGTGGATCTGCCAGCACTGTGCTTCCGGGGGGGGACACGTGGAGCGCTGCACTGGGCCACAGGGGGACCCGGAGCTGGACACAGAGCTGGACACAGACCTGAGACCGGCAAGCTGTCCCTGTCTAACCAGGGGAAAGACGGAGGCTTTGATGGTGATTTCATCACAAACCAAAGAGCAAATCCCTCCAACATCCAATGTAGAGTTAAACGCCAGGGGCTTCAAAAGATCCTTGTGGTTCCAGGTGCCCAGAGCTGCCTGCCACACAACTCCATCGCGGTGCAGCCGGCAGCGGCGCGTGTCACTGGAGACAGAGCCCCGACCAGCCCGGCGCCAGGGCAGCCTGGCTTTGGCCCACAAAAAGGCGGGAGACTCGACGGGCCGGCTCGCTgggggaggaaaagaaaacgCTGACCTGCCCGAATGTGCAATTGTCGTGGTCTGCCGTTTACACACAGGCACACGCTCGCAAAGAAAAGAGACCAGAAGACTCGCTCAGAACCTCCCCTCGCTGAGCCCGGAGGAGCTGGGCTGCCTAAAGCCACGTTCGGACCCACCTCTGACTGGTCTTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016679 True 654 mRNA 0.60 3 27425680 27427034

Neighbor

gene id symbol gene type direction distance location
AMCG00016678 NA coding upstream 9670 27414210 ~ 27416010 (+)
AMCG00016676 atp5g1,LOC107740625,LOC106600830 coding upstream 15759 27406731 ~ 27409921 (+)
AMCG00016680 NA coding upstream 19952 27405408 ~ 27405728 (+)
AMCG00016677 NA coding upstream 21758 27393958 ~ 27403922 (+)
AMCG00016668 NA coding upstream 60732 27358778 ~ 27364948 (+)
AMCG00016682 igf2bp1,LOC108412303,LOC107585078,LOC107740658,LOC107717213 coding downstream 22970 27450004 ~ 27451999 (+)
AMCG00016686 LOC101072148 coding downstream 57599 27484633 ~ 27496345 (+)
AMCG00016684 NA coding downstream 78155 27505189 ~ 27508236 (+)
AMCG00016685 NA coding downstream 101792 27528826 ~ 27538723 (+)
AMCG00016687 rapgefl1 coding downstream 149499 27576533 ~ 27584981 (+)
G15025 NA non-coding upstream 55542 27369589 ~ 27370138 (+)
G15005 hoxb7a,hxb7a,hoxb7,hoxb7ab non-coding upstream 143111 27281424 ~ 27282569 (+)
G14992 NA non-coding upstream 151383 27262890 ~ 27274297 (+)
G14803 NA non-coding upstream 709879 26715569 ~ 26715801 (+)
G14802 NA non-coding upstream 712551 26712231 ~ 26713129 (+)
G15224 NA non-coding downstream 689884 28116918 ~ 28117190 (+)
G15226 NA non-coding downstream 691509 28118543 ~ 28119649 (+)
G15253 NA non-coding downstream 733631 28160665 ~ 28160887 (+)
G15270 NA non-coding downstream 798808 28225842 ~ 28230979 (+)
G15328 NA non-coding downstream 1007950 28434984 ~ 28435256 (+)
AMCG00016663 NA other upstream 431732 26966297 ~ 26993948 (+)
AMCG00016635 NA other upstream 768255 26600093 ~ 26657425 (+)
AMCG00016638 krt222 other upstream 877468 26527319 ~ 26548212 (+)
AMCG00016640 NA other upstream 926438 26489938 ~ 26499242 (+)
AMCG00016633 NA other upstream 992024 26427339 ~ 26433656 (+)
AMCG00016683 NA other downstream 115452 27542486 ~ 27553120 (+)
AMCG00016691 NA other downstream 161445 27588479 ~ 27604879 (+)
AMCG00016690 NA other downstream 186071 27613105 ~ 27626090 (+)
AMCG00016699 LOC106607176 other downstream 350393 27777427 ~ 27799126 (+)
AMCG00016705 NA other downstream 402234 27829268 ~ 27833537 (+)

Expression


Co-expression Network