AMCG00016680


Basic Information

Item Value
gene id AMCG00016680
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 27405408 ~ 27405728 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016680
ATGCAGAAGACCTTACGACCTCTCTCCTTCATCGCGGTCGGGGCAGTGTCCTTGTGCATTCATTCCCACTGCAGTGACGACCCCTGGTGGCCGGAGGGGTGTGCAGCACGGATGCCTGCGCACAAGAAGAGTCCTCGTCGGCAGAATCGTCTGCGAGTTCAAAGGCGCGGCCCAGCGGGGGGGGAGGCGCTGGAATCTCCGCGCCAGCTGTGCGAGGCGCTGCGTTCCTTTGAGAAACAGCTGGATGGCACTCTGCGACCCAGCAGATACTCAGGACCAGATCATGACAGATGGGCCCATCGGAGCTGCTCTCGGCTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016680 True 321 mRNA 0.62 1 27405408 27405728

Neighbor

gene id symbol gene type direction distance location
AMCG00016677 NA coding upstream 1486 27393958 ~ 27403922 (+)
AMCG00016668 NA coding upstream 40460 27358778 ~ 27364948 (+)
AMCG00016660 NA coding upstream 395667 26999267 ~ 27009741 (+)
AMCG00016661 nfe2l1 coding upstream 415095 26977195 ~ 26990313 (+)
AMCG00016655 NA coding upstream 486640 26911968 ~ 26918768 (+)
AMCG00016676 atp5g1,LOC107740625,LOC106600830 coding downstream 1003 27406731 ~ 27409921 (+)
AMCG00016678 NA coding downstream 8482 27414210 ~ 27416010 (+)
AMCG00016679 NA coding downstream 19952 27425680 ~ 27427034 (+)
AMCG00016682 igf2bp1,LOC108412303,LOC107585078,LOC107740658,LOC107717213 coding downstream 44276 27450004 ~ 27451999 (+)
AMCG00016686 LOC101072148 coding downstream 78905 27484633 ~ 27496345 (+)
G15025 NA non-coding upstream 35270 27369589 ~ 27370138 (+)
G15005 hoxb7a,hxb7a,hoxb7,hoxb7ab non-coding upstream 122839 27281424 ~ 27282569 (+)
G14992 NA non-coding upstream 131111 27262890 ~ 27274297 (+)
G14803 NA non-coding upstream 689607 26715569 ~ 26715801 (+)
G14802 NA non-coding upstream 692279 26712231 ~ 26713129 (+)
G15224 NA non-coding downstream 711190 28116918 ~ 28117190 (+)
G15226 NA non-coding downstream 712815 28118543 ~ 28119649 (+)
G15253 NA non-coding downstream 754937 28160665 ~ 28160887 (+)
G15270 NA non-coding downstream 820114 28225842 ~ 28230979 (+)
G15328 NA non-coding downstream 1029256 28434984 ~ 28435256 (+)
AMCG00016663 NA other upstream 411460 26966297 ~ 26993948 (+)
AMCG00016635 NA other upstream 747983 26600093 ~ 26657425 (+)
AMCG00016638 krt222 other upstream 857196 26527319 ~ 26548212 (+)
AMCG00016640 NA other upstream 906166 26489938 ~ 26499242 (+)
AMCG00016633 NA other upstream 971752 26427339 ~ 26433656 (+)
AMCG00016683 NA other downstream 136758 27542486 ~ 27553120 (+)
AMCG00016691 NA other downstream 182751 27588479 ~ 27604879 (+)
AMCG00016690 NA other downstream 207377 27613105 ~ 27626090 (+)
AMCG00016699 LOC106607176 other downstream 371699 27777427 ~ 27799126 (+)
AMCG00016705 NA other downstream 423540 27829268 ~ 27833537 (+)

Expression


Co-expression Network