Item | Value |
---|---|
gene id | AMCG00016691 |
gene name | NA |
gene type | misc |
species | bowfin (Amia calva) |
category of species | ecological fish |
Item | Value |
---|---|
chromosome id | CM030122.1 |
NCBI id | CM030122.1 |
chromosome length | 54868152 |
location | 27588479 ~ 27604879 (+) |
genome version | AmiCal1_2021_bowfin_Genome |
id | name | namespace |
---|---|---|
GO:0003779 | actin binding | molecular_function |
id | description |
---|---|
K19475 | WIPF; WAS/WASL-interacting protein |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
AMCG00016691 | True | 5037 | mRNA | 0.55 | 13 | 27590643 | 27604879 |
TU18716 | False | 1199 | TUCP | 0.64 | 5 | 27588479 | 27599592 |
TU18717 | False | 757 | TUCP | 0.53 | 3 | 27588479 | 27598648 |
TU18718 | False | 3638 | lncRNA | 0.51 | 4 | 27599810 | 27604875 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
AMCG00016687 | rapgefl1 | coding | upstream | 3498 | 27576533 ~ 27584981 (+) |
AMCG00016685 | NA | coding | upstream | 49756 | 27528826 ~ 27538723 (+) |
AMCG00016684 | NA | coding | upstream | 80243 | 27505189 ~ 27508236 (+) |
AMCG00016686 | LOC101072148 | coding | upstream | 92134 | 27484633 ~ 27496345 (+) |
AMCG00016682 | igf2bp1,LOC108412303,LOC107585078,LOC107740658,LOC107717213 | coding | upstream | 136480 | 27450004 ~ 27451999 (+) |
AMCG00016689 | NA | coding | downstream | 2337 | 27607216 ~ 27610772 (+) |
AMCG00016696 | NA | coding | downstream | 159695 | 27764574 ~ 27764813 (+) |
AMCG00016698 | lsm12,LOC107708984,LOC107562026,LOC107693683 | coding | downstream | 205769 | 27810648 ~ 27817193 (+) |
AMCG00016697 | NA | coding | downstream | 217794 | 27822673 ~ 27823994 (+) |
AMCG00016703 | NA | coding | downstream | 257310 | 27862189 ~ 27871186 (+) |
G15025 | NA | non-coding | upstream | 218341 | 27369589 ~ 27370138 (+) |
G15005 | hoxb7a,hxb7a,hoxb7,hoxb7ab | non-coding | upstream | 305910 | 27281424 ~ 27282569 (+) |
G14992 | NA | non-coding | upstream | 314182 | 27262890 ~ 27274297 (+) |
G14803 | NA | non-coding | upstream | 872678 | 26715569 ~ 26715801 (+) |
G14802 | NA | non-coding | upstream | 875350 | 26712231 ~ 26713129 (+) |
G15224 | NA | non-coding | downstream | 512039 | 28116918 ~ 28117190 (+) |
G15226 | NA | non-coding | downstream | 513664 | 28118543 ~ 28119649 (+) |
G15253 | NA | non-coding | downstream | 555786 | 28160665 ~ 28160887 (+) |
G15270 | NA | non-coding | downstream | 620963 | 28225842 ~ 28230979 (+) |
G15328 | NA | non-coding | downstream | 830105 | 28434984 ~ 28435256 (+) |
AMCG00016683 | NA | other | upstream | 35359 | 27542486 ~ 27553120 (+) |
AMCG00016663 | NA | other | upstream | 594531 | 26966297 ~ 26993948 (+) |
AMCG00016635 | NA | other | upstream | 931054 | 26600093 ~ 26657425 (+) |
AMCG00016638 | krt222 | other | upstream | 1040267 | 26527319 ~ 26548212 (+) |
AMCG00016640 | NA | other | upstream | 1089237 | 26489938 ~ 26499242 (+) |
AMCG00016690 | NA | other | downstream | 8226 | 27613105 ~ 27626090 (+) |
AMCG00016699 | LOC106607176 | other | downstream | 172548 | 27777427 ~ 27799126 (+) |
AMCG00016705 | NA | other | downstream | 224389 | 27829268 ~ 27833537 (+) |
AMCG00016706 | LOC102299446 | other | downstream | 231634 | 27836513 ~ 27839103 (+) |
AMCG00016702 | NA | other | downstream | 267784 | 27872663 ~ 27878697 (+) |