AMCG00016714


Basic Information

Item Value
gene id AMCG00016714
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 28147827 ~ 28148678 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016714
ATGGAGaagGGGGATGCCATGAAAACAGTGTACGAGACATTTCATCAGATGCAAATCATCTTCAATAAGGGTGATCATCTGCCCTGGGCAAAGAATCATATACAACCCCTGCGTATCGCGCTGTCCATTCTGGAAGACCATCTGGGCATGTGTGCACAACCCTGGGTAAAGAACGATGATCTGAATAACAACAAGAAGGTTCAAGAGTACTTCAGGAAGCTGGAACAGTATTTGCAGAAGCAGAGATACAGTCGCTGCGCCTGGGAGATGGTCAGAGGCGAAATACGGATAATTCACGTTCAATTTCAATCACTCATGGGAAAGCTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016714 True 330 mRNA 0.46 4 28147827 28148678

Neighbor

gene id symbol gene type direction distance location
AMCG00016713 NA coding downstream 39891 28092244 ~ 28107936 (-)
AMCG00016709 NA coding downstream 150153 27991647 ~ 27997674 (-)
AMCG00016701 tmem101 coding downstream 305159 27840195 ~ 27842668 (-)
AMCG00016700 NA coding downstream 338715 27806349 ~ 27809112 (-)
AMCG00016695 NA coding downstream 409398 27732315 ~ 27738429 (-)
AMCG00016719 NA coding upstream 47749 28196427 ~ 28209980 (-)
AMCG00016716 NA coding upstream 63166 28211844 ~ 28214306 (-)
AMCG00016715 NA coding upstream 67002 28215680 ~ 28221102 (-)
AMCG00016717 LOC103474271 coding upstream 81097 28229775 ~ 28253184 (-)
AMCG00016718 NA coding upstream 115666 28264344 ~ 28272545 (-)
G15228 NA non-coding downstream 89764 28003239 ~ 28058063 (-)
G15206 col1a1,LOC105005744,LOC107585052,LOC107740634,LOC104944135,LOC103393603,LOC108233705,LOC107582926,LOC102798806 non-coding downstream 159398 27979546 ~ 27988429 (-)
G15207 col1a1,col1a1a,LOC107662397,LOC100286406,LOC106600852 non-coding downstream 180971 27964543 ~ 27966856 (-)
G15201 NA non-coding downstream 261267 27885086 ~ 27886560 (-)
G15200 NA non-coding downstream 263397 27883639 ~ 27884430 (-)
G15254 NA non-coding upstream 12009 28160687 ~ 28160940 (-)
G15291 NA non-coding upstream 135684 28284362 ~ 28286445 (-)
G15330 NA non-coding upstream 302720 28451398 ~ 28451632 (-)
G15364 NA non-coding upstream 533160 28681838 ~ 28682338 (-)
G15365 fam171a2,LOC106600878,LOC106607454 non-coding upstream 547020 28695698 ~ 28695920 (-)
G15076 NA other downstream 719176 27424893 ~ 27428651 (-)
G15067 NA other downstream 743905 27401676 ~ 27403922 (-)
G15026 NA other downstream 777688 27369590 ~ 27370139 (-)
AMCG00016671 hoxb6ab,hoxb6,hoxb6a,LOC105013254,LOC103045875,LOC107582892 other downstream 868493 27265887 ~ 27279334 (-)
AMCG00016662 cbx1,cbx1b,LOC108279860 other downstream 1144120 26995173 ~ 27003707 (-)
AMCG00016732 NA other upstream 632794 28781472 ~ 28785507 (-)
AMCG00016740 ormdl3,LOC108273759,LOC107723636,LOC107657273,LOC107556587,LOC102217224,LOC106521946 other upstream 1053194 29201872 ~ 29225587 (-)
G15706 NA other upstream 2052781 30201459 ~ 30202351 (-)
G15787 NA other upstream 2377614 30526292 ~ 30529500 (-)
AMCG00016815 NA other upstream 3231869 31380547 ~ 31388268 (-)

Expression


Co-expression Network