AMCG00016720


Basic Information

Item Value
gene id AMCG00016720
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 28154762 ~ 28181038 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016720
ATGACCCAGAGAAATCTGACTTTCTACTTGAAAAAGAGCGTCGAACTTGTGGACAAGATGGGGGGCGACCTTCCTGACCAATGCGAAGCAGAAGCAGCAGAGATCCGGCTGAATTTCAGTGATCTGATACCAATAACTCGGAAGAATGCAGACACCATGCGGATTATACACAGAGTGCTGAGGCTCTCCACCTTGCTGTACCTAGAAGATCTGAGCTCTGTGTCCTGGGACAAGAGTGACCTGAACGATTTCCGTCACCTTCTCGCACGCCTGAATGAGTCATATAGGTGTCTAAAATCACAGCACGCCGAAGTCAGCTCCCCCGGTCTTAAGAAAACCATGAAAACGATGAAGACTaactttgaaaatatgaaaagctaCCTTAGAAGTCAGAACAACACGTGTGCGTGGGAGCTGCTGAGAAGTGAGATGCGGACGATTCTCCTGCGGCTTCTTCGACTGCGGCCTACCCGAGGAAGCGGCACTGAGCAAGTCATGACTGGATGGATGGTTAGTACTGAAGGCCGAATTATCTGTGAGGGGGTCCAGCCAACCTTTATAACCGGGCTTGCTGCAGTGTTTGCCACTATTTATATCTTCAACCTACAGTACCAAGATGAGGCGGCTCACACACTGGAGTTCATTCAGATgcttCTGCAGCTGTCAGCTGGCAACTTCCCTGATGAGTGCTATGAAGACAACATGAAACTCATGTTTCCGGCGGAAGCCTACATCTTGCCCAAAGAATCGCAGCACCAGGACTTCGTGTTGCTCGCCCACGAAGCTCTGAGCTACATTTTCAGCATCATCCAGAACAACCTGAAATCTGTGCCTTGGGATCGTGACGACGTGGATCATTTCCAGGGTTTAATATTTCGTCAGATGGAAGAGCTGGAGAAATGCATGGACGTGAAAATCACATCTTCAGGCGATTCCAGTAGCCCTACCAAAGGCAAAATGCTTCTGAAAACATACTTTGAAACACTGGAGAAGCTTCTGAAAGATAAGGGCTACAACATCTGTGCCTGGGAAATCATCAGAAAAGAGGTTCTCCATAATCTGCAGGATTTTCATAAATTTCTGAAAAGGCAGAAGAATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016720 True 1101 mRNA 0.47 12 28154762 28181038

Neighbor

gene id symbol gene type direction distance location
AMCG00016711 NA coding upstream 64582 28073595 ~ 28090180 (+)
AMCG00016708 LOC106607474,LOC106600853 coding upstream 103731 28040024 ~ 28051031 (+)
AMCG00016710 NA coding upstream 126488 28006284 ~ 28028274 (+)
AMCG00016704 NA coding upstream 266550 27881440 ~ 27888212 (+)
AMCG00016703 NA coding upstream 283576 27862189 ~ 27871186 (+)
AMCG00016722 LOC107585102,LOC107694961,LOC107740645,LOC107754315,LOC108230875,LOC107662407,LOC103390188,LOC107374630 coding downstream 99460 28280498 ~ 28286427 (+)
AMCG00016721 NA coding downstream 127564 28308602 ~ 28345826 (+)
AMCG00016728 NA coding downstream 477894 28658932 ~ 28660893 (+)
AMCG00016729 NA coding downstream 483776 28664814 ~ 28681501 (+)
AMCG00016730 NA coding downstream 501333 28682371 ~ 28718666 (+)
G15226 NA non-coding upstream 35113 28118543 ~ 28119649 (+)
G15224 NA non-coding upstream 37572 28116918 ~ 28117190 (+)
G15025 NA non-coding upstream 784624 27369589 ~ 27370138 (+)
G15005 hoxb7a,hxb7a,hoxb7,hoxb7ab non-coding upstream 872193 27281424 ~ 27282569 (+)
G14992 NA non-coding upstream 880465 27262890 ~ 27274297 (+)
G15270 NA non-coding downstream 44804 28225842 ~ 28230979 (+)
G15328 NA non-coding downstream 253946 28434984 ~ 28435256 (+)
G15329 NA non-coding downstream 270266 28451304 ~ 28451616 (+)
G15346 NA non-coding downstream 544449 28725487 ~ 28729054 (+)
G15417 NA non-coding downstream 783306 28964344 ~ 29039663 (+)
G15223 NA other upstream 49051 28104737 ~ 28105711 (+)
AMCG00016707 col1a1,LOC100135784,LOC100286406,LOC106600852,LOC105005744 other upstream 155985 27964578 ~ 27998777 (+)
AMCG00016702 NA other upstream 276065 27872663 ~ 27878697 (+)
AMCG00016706 LOC102299446 other upstream 315659 27836513 ~ 27839103 (+)
AMCG00016705 NA other upstream 321225 27829268 ~ 27833537 (+)
AMCG00016731 NA other downstream 562322 28743360 ~ 28761192 (+)
AMCG00016739 wnt3,LOC103381861,LOC108249203,LOC104961604,LOC104925160,LOC105936264,LOC101174231,LOC100707095,LOC108273758,LOC106589299,LOC101469754 other downstream 1053466 29234504 ~ 29256824 (+)
AMCG00016769 NA other downstream 1841569 30022607 ~ 30107727 (+)
AMCG00016772 g6pc other downstream 1891900 30072938 ~ 30083528 (+)
AMCG00016770 rpl27,LOC106601555,LOC107551168 other downstream 1928561 30109599 ~ 30113284 (+)

Expression


Co-expression Network