AMCG00016723


Basic Information

Item Value
gene id AMCG00016723
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 28386229 ~ 28387692 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016723
ATGGCTGCGATGGCTCCCGCTCTGACCGACGCGCCAGCCGAAGCTCACCACATCCGCTTCAAACTGGCTCCCCCTTCCTCCACCCTCTCCCCAGGCAGCGTGGAGAACAACAGCAACGCCAGCAACATCATTCTCTCCAGCAACGGAGCAGTTAAGCGCAAGCCCATCGTCTCATCCGGTGAAGAACGTGCCCTAGACTTCCGGGGCAGCAGCAAGaaggaggagcagcagcagcaccaggaGTCGTCGCCACCGACGCCTCTGGGCAAGCTGCAGCCTCTGGTGGCCTCTTATCTCTGCTCTGATGTGACTTCGGTCCCATCCACTAAGGAGTCCCTGAAACTGCAAGGCGTTCTCATCAAGCAGACAGTCCTCAAGTCCCACGCCATCCTGCCAAATACCTACTTTAACAGCAGAAAGCACCAGACTTTGGAGTTTTCCGGGGACCAGATCAAAAGCATCATGAGTGTCAGCAGCACACCTGTCTCCCAACCACAGGCCCCGGTCAACGGCCTCGCTAAGAAACTAGGAAAGTCTACCGCCGGCTCCGAGCGGGACTGCCCCGCAGCTCTGGCTGCTGTCAATGGTAACAAGCCCCCTGCCATCCAGGACTCCCACCTGCACACAGTGCCAGGGGCCAACTCTGCCTTGATCAGAGGAGATTTGACTGGTTCTGTTCTTCTCAAAGGAGGAGGCTCagatcagcagcagcagcagccaccgCCTGCTGGGATTTTGAAAGACGCTGCAAATAACTCTGAGCCGCCTCCTCCTTCCTCCACTAACGCTGCCCCTGCAGCCGGGGCTGCGGTGAGCCAGCTGGACTTGACGTCCGAGCAGACGGACGCCGATGATGGGGAGGAGGAAAGCAGCAGTTCTTCCGTTCGGCTGGGGCTGATTTCCCTGGACTCGGAGGGTGCGGGCTGCAGTGGGAGCAACAGGCAAGCGAAATCAGCCCACTCTCCGATAGCCCCCCAGCCCCAGCAATTCAGCAGCTTAGACGCGGAGGTCAGGGCCCGGAGCCTGGTGAACCAGAACCGGCAGAATGAGATAGAGAACAGACTGCGCCGGCTGCGTAAGCGGCTGCAGGTGGTACAGGCCAAGCAGGTGGAGCGTCACGTGCAGCAGCAGCTTGGCAGCTTCCTGCAGACCACCTTCAGCAAACTGCCCAGTCTGGACTCCCTGCGACAACGCAGCCCCGCCGTCCTCACCCGTAAGGCCGAGGCGGCGCTGCGCCGGGCCGCCAGCGAGACAGGTGGGGACGATGGGCTCAGCCAATTCCTGAAGAGCGGCTCGGTGCCCACAGAGCTGGAGAGGCTCTCACTCAGCGGCACGGCCAACCTCAGGGCCACAGAGAGCGCCTTCGACTCGGACGTCACCGAGAGCAGCTCAGGGGGGGAGACTGACATTGAGGAAGAGGAGCTGACCAAAGTGGACATTGAGCAGCGCCACATCTCACTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016723 True 1464 mRNA 0.61 1 28386229 28387692

Neighbor

gene id symbol gene type direction distance location
AMCG00016724 NA coding downstream 28449 28350369 ~ 28357780 (-)
AMCG00016718 NA coding downstream 113684 28264344 ~ 28272545 (-)
AMCG00016717 LOC103474271 coding downstream 133045 28229775 ~ 28253184 (-)
AMCG00016715 NA coding downstream 165127 28215680 ~ 28221102 (-)
AMCG00016716 NA coding downstream 171923 28211844 ~ 28214306 (-)
AMCG00016725 cdc27,LOC106600875 coding upstream 18029 28405721 ~ 28419910 (-)
AMCG00016726 LOC105890724,LOC107754311,LOC108413653,LOC108261365,LOC107694956 coding upstream 89822 28477514 ~ 28492616 (-)
AMCG00016727 NA coding upstream 122134 28509826 ~ 28518748 (-)
AMCG00016733 s2540,LOC106601558,LOC108434938 coding upstream 337917 28725609 ~ 28738603 (-)
AMCG00016736 dlx3,dlx3b coding upstream 561758 28949450 ~ 28953796 (-)
G15291 NA non-coding downstream 99784 28284362 ~ 28286445 (-)
G15254 NA non-coding downstream 225289 28160687 ~ 28160940 (-)
G15228 NA non-coding downstream 328166 28003239 ~ 28058063 (-)
G15206 col1a1,LOC105005744,LOC107585052,LOC107740634,LOC104944135,LOC103393603,LOC108233705,LOC107582926,LOC102798806 non-coding downstream 397800 27979546 ~ 27988429 (-)
G15207 col1a1,col1a1a,LOC107662397,LOC100286406,LOC106600852 non-coding downstream 419373 27964543 ~ 27966856 (-)
G15330 NA non-coding upstream 63706 28451398 ~ 28451632 (-)
G15364 NA non-coding upstream 294146 28681838 ~ 28682338 (-)
G15365 fam171a2,LOC106600878,LOC106607454 non-coding upstream 308006 28695698 ~ 28695920 (-)
G15448 NA non-coding upstream 678419 29066111 ~ 29066388 (-)
G15525 NA non-coding upstream 873620 29261312 ~ 29264667 (-)
AMCG00016712 NA other downstream 229029 28130012 ~ 28157200 (-)
G15076 NA other downstream 957578 27424893 ~ 27428651 (-)
G15067 NA other downstream 982307 27401676 ~ 27403922 (-)
G15026 NA other downstream 1016090 27369590 ~ 27370139 (-)
AMCG00016671 hoxb6ab,hoxb6,hoxb6a,LOC105013254,LOC103045875,LOC107582892 other downstream 1106895 27265887 ~ 27279334 (-)
AMCG00016732 NA other upstream 393780 28781472 ~ 28785507 (-)
AMCG00016740 ormdl3,LOC108273759,LOC107723636,LOC107657273,LOC107556587,LOC102217224,LOC106521946 other upstream 814180 29201872 ~ 29225587 (-)
G15706 NA other upstream 1813767 30201459 ~ 30202351 (-)
G15787 NA other upstream 2138600 30526292 ~ 30529500 (-)
AMCG00016815 NA other upstream 2992855 31380547 ~ 31388268 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location