XLOC_006154 (dmac2l)


Basic Information

Item Value
gene id XLOC_006154
gene name dmac2l
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 36680564 ~ 36691709 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012114
GCAGGTGAAAGAGCGAGCGCGCATGGAGGACGCAGGATGTAAATAACGAACCCGTCAGAACTGCAACAAGCCGAACAGCAGGCCATAAATATGAGATTGTTCACCTGGTCAGCGCGGAGGATTTTATCCGCTCATAAGCAGCCGTCAGGGGGCAGACGAGAGTTCTGGGGCTGGCTGAATGCTGTTTTCAACAATTGATTATGAGCGTATTAAAGCAGTAGGTCCTGATCGAGCTGCTGCCGAGTGGCTCCTGAGGTGCGGTGCTAAAGTTCGCTTCCGTGGTTTCGACCGCTGGCAGCACGACTACAACGGACTCCCAACGGGGCCACTGGGCAGATACCGGATTGAAGCTATTGATGCCACAGAGTCCTGTATCATGTACCGAGGGTTTGATCATCTGGAGGGTCTGGAGCATGTTGAGGAGATCAGGTTGAAtaagtgtatttatatagaaGACGCCTGCCTGGAGCGTTTGGGTCAGATAAAGACGCTGCAGGACACTGTAAAGCAGATGACAGTAGTTTCCTGTGGCAACGTGACAGATAAAGGACTCATCGCCCTTCATCACCTCGGGAAGCTGGAGAGGCTGTTTCTCAGTGATCTCCCTGGTGTAAAAGATAAAGATCAGACTGTGGACAGACTCCAGGCTGCACTTCCCAGACTCACCATAGAGCTAGATCTCGCTTAACCAATCACAGCACATTTGGAAAACCACAACTCTCACAGCCATACGAGCAGAGGCAAACCCTCTGGCTGATGTCCATCACTACTTCGGCAACAGTATCCAGGCAACTGAGCATCACAGGGCAGGATGCAGAAAATCAAAGAACCGGCATCCCATCTGATTAGCTTTTGATTACATTTTGTCAGACTACCCGAGGCAGTTGAACGATGTTATTTTGCCATTATCAATAAATTTCCAGCTGTTTCCTCACACA
>TCONS_00012115
AGGATGTAAATAACGAACCCGTCAGAACTGCAACAAGCCGAACAGCAGGCCATAAATATGAGATTGTTCACCTGGTCAGCGCGGAGGATTTTATCCGCTCATAAGCAGCCGTCAGGGGGCAGACGAGAGTTCTGGGGCTGGCTGAATGCTGTTTTCAACAAAGTTGATTATGAGCGTATTAAAGCAGTAGGTCCTGATCGAGCTGCTGCCGAGTGGCTCCTGAGGTGCGGTGCTAAAGTTCGCTTCCGTGGTTTCGACCGCTGGCAGCACGACTACAACGGACTCCCAACGGGGCCACTGGGCAGATACCGGATTGAAGCTATTGATGCCACAGAGTCCTGTATCATGTACCGAGGGTTTGATCATCTGGAGGGTCTGGAGCATGTTGAGGAGATCAGGTTGAAtaagtgtatttatatagaaGACGCCTGCCTGGAGCGTTTGGGTCAGATAAAGACGCTGCAGGACACTGTAAAGCAGATGACAGTAGTTTCCTGTGGCAACGTGACAGATAAAGGACTCATCGCCCTTCATCACCTCGGGAAGCTGGAGAGGCTGTTTCTCAGTGATCTCCCTGGTGTAAAAGATAAAGATCAGACTGTGGACAGACTCCAGGCTGCACTTCCCAGACTCACCATAGAGCTAGATCTCGCTTAACCAATCACAGCACATTTGGAAAACCACAACTCTCACAGCCATACGAGCAGAGGCAAACCCTCTGGCTGATGTCCATCACTACTTCGGCAACAGTATCCAGGCAACTGAGCATCACAGGGCAGGATGCAGAAAATCAAAGAACCGGCATCCCATCTGATTAGCTTTTGATTACATTTTGTCAGACTACCCGAGGCAGTTGAACGATGTTATTTTGCCATTATCAATAAATTTCCAGCTGTTTCCTCAC

Function

symbol description
dmac2l Predicted to be located in mitochondrial inner membrane. Predicted to be active in cytoplasm. Orthologous to human DMAC2L (distal membrane arm assembly component 2 like).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-959 Predicted to be located in mitochondrial inner membrane. Predicted to be active in cytoplasm. Orthologous to human DMAC2L (distal membrane arm assembly component 2 like).

Ensembl:

ensembl_id ENSDARG00000012072

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012114 False 938 mRNA 0.50 5 36680564 36691709
TCONS_00012115 True 904 mRNA 0.49 5 36680597 36691706

Neighbor

gene id symbol gene type direction distance location
XLOC_006153 si:ch211-67f24.7 coding upstream 41595 36633355 ~ 36638969 (+)
XLOC_006152 si:ch211-67f24.7 coding upstream 54472 36613359 ~ 36626092 (+)
XLOC_006151 gmfb coding upstream 73623 36585399 ~ 36606941 (+)
XLOC_006150 TTC9 coding upstream 526992 36144341 ~ 36153572 (+)
XLOC_006149 NA coding upstream 685397 35989155 ~ 35995167 (+)
XLOC_006155 atl1 coding downstream 73006 36764715 ~ 36784400 (+)
XLOC_006156 tmx1 coding downstream 231343 36923052 ~ 36934915 (+)
XLOC_006157 frmd6 coding downstream 266377 36958086 ~ 36997761 (+)
XLOC_006158 esr2b coding downstream 330892 37022601 ~ 37072558 (+)
XLOC_006159 gphb5 coding downstream 581301 37273010 ~ 37289109 (+)
XLOC_006140 CU681845.1 non-coding upstream 1158388 35483618 ~ 35522176 (+)
XLOC_006135 NA non-coding upstream 1695651 34752174 ~ 34984913 (+)
XLOC_006160 NA non-coding downstream 846944 37538653 ~ 37544321 (+)
XLOC_006162 BX005106.1 non-coding downstream 982469 37674178 ~ 37674294 (+)
XLOC_006163 BX322660.1 non-coding downstream 1458808 38150517 ~ 38150637 (+)
XLOC_006165 NA non-coding downstream 1534367 38226076 ~ 38284199 (+)
XLOC_006175 NA non-coding downstream 2992762 39684471 ~ 39727464 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000012_05079456_05083333 ATP5S coding CI01000012 null 5079247 ~ 5083333 (-)