AMCG00016734 (myst2,LOC107689642,LOC107554133,LOC106607195)


Basic Information

Item Value
gene id AMCG00016734
gene name myst2,LOC107689642,LOC107554133,LOC106607195
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 28762024 ~ 28777025 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016734
ggaaaagaaaacagccAGTGTGCGGCGCGGCGGCTGCGCGTCTTCTGTGTACATATGAATTTTTAAAGCCGCGTCAATAATCATCCGCTGCAATTATCGACCTTGAAATACAGTTCACACCCCACAAAATAGGAACCATTTCACTCCCACAAGAAACAATGCCCCGGAGGAAGAGGAATGCAGGCAGCAGTTCTGACGGTACGGAGGACTCCGATTTCTCTGCCGACCTGGAGCACACGGACAGCTCGGAGAGCGACGCGAACACGCGCAGGAACACACGGCTCACCCGCGCGTCTGTCCGCCTCAGCCAGAGCTCACaagATTCCAGTCCAGTTCGGAACCTGCCGTCCTTGGGTGCGGATGATGCCGCCTTTTCCACCAGGCGTGTGACCCGTAGCCAGCAGCAGGGGGCACCAGTCACCCCAAAGAAATACCCCCTGCGTCAGAGCCGTTCCTCCGGATCGGAAACGGAGCAAGCCATCGACTTCTCCGACAGGGACCTGAAGCACGCAGTGGACCACGACGAGTCGCCCCCGCGCACCCCTACAGGCAACGCCCCCTCCTCGGAGTCAGACATCGATATCTCCAGCCCCAACGCCTCCCACGACGAGAGCCTGGCTAAGGACCTGTCGCTCAAGGACTCGGGCAGCGACCTTTCCCACCGGCCCAAGCGACGCCGCTTCCACGAGAGCTACAACTTCAACATGAAGTGCCCAACTCCTGGCTGCAACTCCCTGGGGCACCTTACGGGAAAGCATGAAAGACATTTCTCCATATCCGGATGTCCACTCTACCATAATTTATCTGCTGATGAGTGCAAGGTGAGAGCCACCAATCGGGACAAGCAGGTGGAGGAGCGAACGCTGTCGCACCGGCAGGATGAGAACAACCGGCACGCCACTCGGCACCAGGCCCCTACAGAGAGGCAGATGAGGTACAAGGAGAAGGTGACTGAgatgaggaagaagaggaaCTCTGGCCTTCTGAAGGAGCAGAAGGAGAGATACATGGAGAAATTGAGGCTACAAGGCCAAATCACAGAGGGCAGTAACATGATCAAGACCATCCTGTTTGGCCGCTATGAGCTGGACACCTGGTACCACTCACCCTACCCTGAGGAATACGCGCGGCTGGGGCGGCTGTACATGTGCGAGTTCTGCCTTAAGTACATGAAGAGCCAGACCATTCTCCGCAGACACATGGCGAAATGCGTATGGAAGCACCCCCCAGGAGATGAAATTTACAGAAAGGGAGCCATATCGGTGTTCGAGGTTGACGGCAAAAAAAATAAGataTACTGTCAGAACCTGTGCTTGCTAGCGAAACTGTTCCTGGACCACAAGACACTCTACTATGACGTGGAGCCCTTCCTTTTCTACGTGATGACGGAGGCGGACAACACAGGATGCCATCTAGTTGGTTACTTCTCCAAGGAGAAGAATTCGTTCCTGAACTACAATGTTTCCTGCATCTTGACGATGCCACAGTATATGAGGCAGGGATACGGCAAGATGCTGATTGATTTCAGTTATTTATTGTCAAAGGTAGAGGAGAAGGTAGGCTCCCCGGAGCGTCCTCTCTCAGACTTGGGTCTCATCAGTTACCGCAGTTACTGGAAGGAGGTGCTACTACGCTACCTGCATAATTTCCAGGGGAAGGAGATCTCCATCAAAGGACCTGATAGACGAGTGGAAGTCCAAGGAAGCAAAAAGAGGCGGCAGCAACAAAACCATCGACCCCAGCTCTTTAAAATGGACCCCTCCCAAAGGAACATAATGCTCTGGCCAGGGGATCTCTTCTTCAGCCGGGCTGCTCAGTACAACACCGTGTTATTCAGCTAGCAAACCTGTCAGTAGTAGATGTAGAGCTATTGCTGCTGTGGGGAGCAGGACCACTGGTGCCACCTGGCCCCAGCAAGGTACTGGAGGGGCAGAGGAGTAGtcttttatttttggggggttcCATCCCTTCCTGAATTGTCCCATCATTGTTCATTTCTTCTTACTTGATGCTGTACTGCGGTTTAGCTTTCAGAAATGCcaggatttcctttttttttttttttttttttaatatacgtgtgtggatgtgtgtgtggatgttattttatttgcattt

Function

symbol description
myst2 histone acetyltransferase MYST2

NR:

description
PREDICTED: histone acetyltransferase KAT7-like isoform X2

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K11307 MYST2, HBO1, KAT7; histone acetyltransferase MYST2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016734 True 2118 mRNA 0.53 13 28762024 28777025

Neighbor

gene id symbol gene type direction distance location
AMCG00016730 NA coding upstream 43358 28682371 ~ 28718666 (+)
AMCG00016729 NA coding upstream 80523 28664814 ~ 28681501 (+)
AMCG00016728 NA coding upstream 101131 28658932 ~ 28660893 (+)
AMCG00016721 NA coding upstream 416198 28308602 ~ 28345826 (+)
AMCG00016722 LOC107585102,LOC107694961,LOC107740645,LOC107754315,LOC108230875,LOC107662407,LOC103390188,LOC107374630 coding upstream 475597 28280498 ~ 28286427 (+)
AMCG00016735 dlx4b,LOC105899934,LOC106600935,LOC106583890,LOC105028424 coding downstream 141091 28918116 ~ 28929190 (+)
AMCG00016737 NA coding downstream 222636 28999661 ~ 29014142 (+)
AMCG00016745 cdk5r1,LOC108426451 coding downstream 551504 29328529 ~ 29329440 (+)
AMCG00016746 NA coding downstream 592733 29369758 ~ 29371719 (+)
AMCG00016747 NA coding downstream 629090 29406115 ~ 29424802 (+)
G15346 NA non-coding upstream 32970 28725487 ~ 28729054 (+)
G15329 NA non-coding upstream 310408 28451304 ~ 28451616 (+)
G15328 NA non-coding upstream 326768 28434984 ~ 28435256 (+)
G15270 NA non-coding upstream 531045 28225842 ~ 28230979 (+)
G15253 NA non-coding upstream 601137 28160665 ~ 28160887 (+)
G15417 NA non-coding downstream 187319 28964344 ~ 29039663 (+)
G15422 thrab,LOC108430158,LOC106579329,LOC107665883 non-coding downstream 266692 29043717 ~ 29043973 (+)
G15424 NA non-coding downstream 280661 29057686 ~ 29058167 (+)
G15425 NA non-coding downstream 289092 29066117 ~ 29066407 (+)
G15450 NA non-coding downstream 367657 29144682 ~ 29179798 (+)
AMCG00016731 NA other upstream 832 28743360 ~ 28761192 (+)
G15223 NA other upstream 656313 28104737 ~ 28105711 (+)
AMCG00016707 col1a1,LOC100135784,LOC100286406,LOC106600852,LOC105005744 other upstream 763247 27964578 ~ 27998777 (+)
AMCG00016702 NA other upstream 883327 27872663 ~ 27878697 (+)
AMCG00016706 LOC102299446 other upstream 922921 27836513 ~ 27839103 (+)
AMCG00016739 wnt3,LOC103381861,LOC108249203,LOC104961604,LOC104925160,LOC105936264,LOC101174231,LOC100707095,LOC108273758,LOC106589299,LOC101469754 other downstream 457479 29234504 ~ 29256824 (+)
AMCG00016769 NA other downstream 1245582 30022607 ~ 30107727 (+)
AMCG00016772 g6pc other downstream 1295913 30072938 ~ 30083528 (+)
AMCG00016770 rpl27,LOC106601555,LOC107551168 other downstream 1332574 30109599 ~ 30113284 (+)
G15659 NA other downstream 1459429 30236454 ~ 30236841 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000047_02602977_02614833 MYST2, KAT7B, KAT7 coding CI01000047 null 2602977 ~ 2615082 (+)