AMCG00016738


Basic Information

Item Value
gene id AMCG00016738
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 29021627 ~ 29024518 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016738
ATGGCTGCTGGGCAGCTGAGCGGCTCAGGAGGGAGATATGAGCAGAGGGAGCTGGGCTTATTTGCTCCAAGTCGAGTGGTTAAGAAGCTACTGCAATCGGCCGGGTGCAGTATGGGGCAGATGCAGCAGGGGGCTGATCTCTTGCCCTCTCACCTGTCTGCAGGTAGCAAGCAATTGGGATTGGTGTGGAATGGACAGAGGCTCAGCTGATtgttggagagagagggaaacaaacatttgcattaaaactgtGGCTGCAGTGGTGTGGAAGTCCTGGTGCTGTGGAACCCCcaactttgtattgtttttcagctTGCTGGTGGTTGGAGGTGTGTTTGGAGGTCTTTCCCCCTCCCAGGCTGTTGGAGAGGATCTCTTCAGTTGAAGGAGACTGCAGAGTGTgactaacatttgttttccattatgaATTTGCTCTGCTCCGCTCCTCTCCCTTTTCTGTTGGCTGAAATAAAATTATGTGAAGTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016738 True 488 mRNA 0.51 4 29021627 29024518

Neighbor

gene id symbol gene type direction distance location
AMCG00016736 dlx3,dlx3b coding downstream 67831 28949450 ~ 28953796 (-)
AMCG00016733 s2540,LOC106601558,LOC108434938 coding downstream 283024 28725609 ~ 28738603 (-)
AMCG00016727 NA coding downstream 502879 28509826 ~ 28518748 (-)
AMCG00016726 LOC105890724,LOC107754311,LOC108413653,LOC108261365,LOC107694956 coding downstream 529011 28477514 ~ 28492616 (-)
AMCG00016725 cdc27,LOC106600875 coding downstream 601717 28405721 ~ 28419910 (-)
AMCG00016741 NA coding upstream 167216 29191734 ~ 29201720 (-)
AMCG00016743 nsf,LOC107601245,LOC108260232,LOC107688085 coding upstream 241241 29265759 ~ 29288483 (-)
AMCG00016742 LOC104926834,LOC100703712,LOC108442534,LOC107688086,LOC107709998,LOC107601249 coding upstream 288870 29313388 ~ 29322785 (-)
AMCG00016744 myo1d,LOC107743773,LOC107677861,LOC106908042 coding upstream 331674 29356192 ~ 29362007 (-)
AMCG00016748 NA coding upstream 348134 29372652 ~ 29405744 (-)
G15365 fam171a2,LOC106600878,LOC106607454 non-coding downstream 325707 28695698 ~ 28695920 (-)
G15364 NA non-coding downstream 339289 28681838 ~ 28682338 (-)
G15330 NA non-coding downstream 569995 28451398 ~ 28451632 (-)
G15291 NA non-coding downstream 735182 28284362 ~ 28286445 (-)
G15254 NA non-coding downstream 860687 28160687 ~ 28160940 (-)
G15448 NA non-coding upstream 41593 29066111 ~ 29066388 (-)
G15525 NA non-coding upstream 236794 29261312 ~ 29264667 (-)
G15585 NA non-coding upstream 778377 29802895 ~ 29807133 (-)
G15673 psme3,LOC106589310,LOC107706898,LOC107669474 non-coding upstream 1014272 30038790 ~ 30041875 (-)
G15675 NA non-coding upstream 1018057 30042575 ~ 30044565 (-)
AMCG00016732 NA other downstream 236120 28781472 ~ 28785507 (-)
AMCG00016712 NA other downstream 864427 28130012 ~ 28157200 (-)
G15076 NA other downstream 1592976 27424893 ~ 27428651 (-)
G15067 NA other downstream 1617705 27401676 ~ 27403922 (-)
G15026 NA other downstream 1651488 27369590 ~ 27370139 (-)
AMCG00016740 ormdl3,LOC108273759,LOC107723636,LOC107657273,LOC107556587,LOC102217224,LOC106521946 other upstream 177354 29201872 ~ 29225587 (-)
G15706 NA other upstream 1176941 30201459 ~ 30202351 (-)
G15787 NA other upstream 1501774 30526292 ~ 30529500 (-)
AMCG00016815 NA other upstream 2356029 31380547 ~ 31388268 (-)
AMCG00016847 NA other upstream 3237031 32261549 ~ 32267968 (-)

Expression


Co-expression Network