AMCG00016759


Basic Information

Item Value
gene id AMCG00016759
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 29658076 ~ 29662545 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016759
ATGACTGCATGCACCGAGAGCCAGGCCCCTGCGGTGCATGGCTTGACTCAATTCATGCTGCTGTCCTTTATCGCGGCCCCTGCAGCAGCTGCTATGATTGGAGTGGAGCGCCACGGCCTTATCATCGGGCTGCAGACACGGTGGATCGCACGGCCCCCGGAAAGCATGATGCCAACGAAACAAATGCAGCTTGCAGATCAAAACCGATTAGCGGCTCTGAATCTcttatACCCTGTGAGGCGGCGCTGGGATgcgggcagcagcagcagcagcagctcgtCTCACTCGCAGACTGAGCCCCGCGGAGTGGACCCAGCCACGGACAGCACCGCGCTCTCCATCCTATTCACCGCACAAGCAGAAGATGGTGAAGATGCCGAGAAGGAGAGCTGCCCATTTTACCTTTCCGTCTTTCGGCTGAGCAAACACACATCtacaagaaaaaaagtcaagGGAGGCTCgcacttttaa

Function

GO:

id name namespace
GO:0006814 sodium ion transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016759 True 471 mRNA 0.57 3 29658076 29662545

Neighbor

gene id symbol gene type direction distance location
AMCG00016747 NA coding upstream 233274 29406115 ~ 29424802 (+)
AMCG00016746 NA coding upstream 286357 29369758 ~ 29371719 (+)
AMCG00016745 cdk5r1,LOC108426451 coding upstream 328636 29328529 ~ 29329440 (+)
AMCG00016737 NA coding upstream 643934 28999661 ~ 29014142 (+)
AMCG00016735 dlx4b,LOC105899934,LOC106600935,LOC106583890,LOC105028424 coding upstream 728886 28918116 ~ 28929190 (+)
AMCG00016754 NA coding downstream 134 29662679 ~ 29670116 (+)
AMCG00016756 psmd3,psd3,LOC100194647 coding downstream 12701 29675246 ~ 29682041 (+)
AMCG00016755 NA coding downstream 21798 29684343 ~ 29690851 (+)
AMCG00016753 dusp3,dusp3a,LOC107669488 coding downstream 54529 29717074 ~ 29731366 (+)
AMCG00016757 LOC106589308 coding downstream 75552 29738097 ~ 29743251 (+)
G15505 rara,LOC106578316,LOC108434941,LOC107571738 non-coding upstream 231459 29425900 ~ 29426617 (+)
G15475 NA non-coding upstream 344368 29233750 ~ 29313708 (+)
G15461 NA non-coding upstream 444469 29213230 ~ 29213607 (+)
G15460 NA non-coding upstream 446358 29211497 ~ 29211718 (+)
G15457 NA non-coding upstream 456310 29199721 ~ 29201766 (+)
G15591 NA non-coding downstream 228371 29890916 ~ 29893494 (+)
G15605 NA non-coding downstream 268119 29930664 ~ 30019687 (+)
G15651 NA non-coding downstream 550627 30213172 ~ 30215710 (+)
G15730 NA non-coding downstream 766508 30429053 ~ 30431794 (+)
G15817 NA non-coding downstream 1243065 30905610 ~ 30906839 (+)
AMCG00016739 wnt3,LOC103381861,LOC108249203,LOC104961604,LOC104925160,LOC105936264,LOC101174231,LOC100707095,LOC108273758,LOC106589299,LOC101469754 other upstream 401252 29234504 ~ 29256824 (+)
AMCG00016731 NA other upstream 896884 28743360 ~ 28761192 (+)
G15223 NA other upstream 1552365 28104737 ~ 28105711 (+)
AMCG00016707 col1a1,LOC100135784,LOC100286406,LOC106600852,LOC105005744 other upstream 1659299 27964578 ~ 27998777 (+)
AMCG00016702 NA other upstream 1779379 27872663 ~ 27878697 (+)
AMCG00016769 NA other downstream 360062 30022607 ~ 30107727 (+)
AMCG00016772 g6pc other downstream 410393 30072938 ~ 30083528 (+)
AMCG00016770 rpl27,LOC106601555,LOC107551168 other downstream 447054 30109599 ~ 30113284 (+)
G15659 NA other downstream 573909 30236454 ~ 30236841 (+)
G15855 LOC105013322 other downstream 1396795 31059340 ~ 31061145 (+)

Expression


Co-expression Network