AMCG00016765


Basic Information

Item Value
gene id AMCG00016765
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 30067321 ~ 30071224 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016765
TTTTCCTACTAATAACTGTTTTAGGACTTTGTTTCGCCctacagaaaaggaaaagaccAAAATAAACCCACTTATCCTAAAAACAAGTCACGTGATGTCTTTGGTTGGCCAATGGCTGTGCGTGGTGGTTGGGGGACGAGCAGATTAGCAAGGTACTGCTGGAAGACAGGACACTGACACAGACTGCTGTTTATCAGTGCAGGCTTACCCCCATGGCTGAAAGGTTAAGGGAACTGTCCTGGATTCCCTGAAAGGCAAACAAATACACCTGATCTGCTATAAAGTCAGGCAGGGGGGGACAGCAGTGCAGTTCTGGGAGTTCAGCGGTGCTGCAGTAGAGTCGTGCTCAGAGACACTCAGAGGGACGTGACTGTTGGCTCATGGACTGGCTGCACAGTGCTGGAGTGGACGTGGCTGTCCACCTGCAGGCCCGGTTCAGCGCCTACGAGGACTGGTTCCACCTGGCCTCCTCCGTGGCCGACCTGCACACGCCCATCTTCATCTTCTTCCCCCTGTGGTTCCACCTGCGCCCGTCAGTGGGCGTCAAGCTCATCTGGGTGGCCGTGATAGGGGACTGGCTCAATCTGGTGTTGAAATGGGTTCTGTTTGGAGAGAGGCCCTATTGGTGGGTCCACGAGACACAGTTCTATGGTTCCATTCCGGCGCCCGTGCTGCGGCAGTCCCCCATCACCTGTGAAACTGGGCCAGGCAGTCCCTCGGGCCACGCCATGGGATCCGCGGGGGTGTGGTATGTGATGGTAACGGCTGTACTCTCCATTGCCTCTGAGAAAAAGCACTCCTCTCTCCTGACTGGAGCCCTGCACGTGGTACTGTGGACCCTGCTGTGTGCGGTGGAGCTGATCGTTTGCATGTCCAGGGTCTATGTTGCTGCCCATTTCCCACACCAGGTCATCACAGGTGTCATCTCAGGCATCATCGTGGCGGAGGTGTTTTCCCGAGTGCAGTGGATCTACCGTGCCAATATGATGAGGTACCTCCTCACCACTCTGTTCCTGCTGACCTTTGCTCTGGGCTTCTATCTGCTGCTGCTCGCGCTGGGCGTGGACCTGCTCTGGACGCTGGAGAAAGCGAAGCGGTGGTGCGTGCGAGCCGAGTGGGTCCACATGGACACCACGCCCTTTGCCAGCCTGTTGCGCAACCTCGGCACCCTATTCGGCCTTGGGCTGGGCCTGCACTCGCCGCTCTACACTGAGAGAAAGCCGGGCCGCAGCGCCCCCTTCAGACTAGGCTGCATCACCgcctcgctgctgctgctgcagctcctgGATCTGTTTCACTTCTCTTCTGAAAATGAGCTGCTCTTCTACATGCTCTCCTTCTGCAAGAGCGCCACTGCCCCATTTATCACTGTGGCCCTCGTACCCTGGGCCCTCTCTGGCTTCTGTCAGCACCAGGGCAGGAAGAAGGACTGGTGAACTCAGAGGGGTGCCACATTCACCCACGCAGGTTGAGCACCCCACCAGGGAGTCTCTGCTTTGATATCCGCTGACACCGAATCGGTGCAATCATCAGCACAGAGGATGAATTAACTCCTGGCCAATTCCCATGATTGTGGCCAGAATCCAAGGTCTGAAATGTTTGAGCACCAGACTGCAGTATGCCTGTGTTTGTGCTTTGAAGCTGTAAACGAAACGCTAGATGAAAATGTACTATTTCACTTGGTGAGCACTTGATGAAAATGCTATGAgaatgtatttctattttattgtttttaaattgagcCTTGTTGGCTATTAAAATACAGGAGAGAAGAATCCAAGGTGTAGCCTCAGTCTTCTGCCCAGAGTAAGAGTAACATAAAGTAACACAAGTAATAGCACGTGTAAGTGGTGTTTCCCAATCTTGTCAAGtccaacacacacatgtacttCACTTCCCGCCTTCCCACCCGAGCATTAACTTGAAAACAACACTAAATTTCAGTGAAGAGAGcattattttgattgaattaACTACATTTTGCATAGTTTTGATGTGGCACCTCTTGTCTATGCATTGGTGGCTGGCCACAAAGAGGGAGAATACTTGATTCACTGTTTTCCATATCGGCATGTCatgtacatacagtataatgcAG

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K01084 G6PC; glucose-6-phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016765 True 2098 mRNA 0.52 5 30067321 30071224

Neighbor

gene id symbol gene type direction distance location
AMCG00016768 NA coding downstream 31279 30019515 ~ 30036042 (-)
AMCG00016767 NA coding downstream 53386 30008137 ~ 30013935 (-)
AMCG00016766 arl4d,LOC107552768,LOC106579387,LOC107706901 coding downstream 70464 29993530 ~ 29996857 (-)
AMCG00016762 dhx8,LOC107706906 coding downstream 162665 29893213 ~ 29904656 (-)
AMCG00016758 med24 coding downstream 352856 29701416 ~ 29714465 (-)
AMCG00016774 NA coding upstream 17623 30088847 ~ 30099607 (-)
AMCG00016773 NA coding upstream 52627 30123851 ~ 30139691 (-)
AMCG00016775 NA coding upstream 90569 30161793 ~ 30174288 (-)
AMCG00016779 gosr2,LOC107654523,LOC107721531,LOC107674598 coding upstream 145020 30216244 ~ 30223409 (-)
AMCG00016780 NA coding upstream 165750 30236974 ~ 30241569 (-)
G15675 NA non-coding downstream 22756 30042575 ~ 30044565 (-)
G15673 psme3,LOC106589310,LOC107706898,LOC107669474 non-coding downstream 25446 30038790 ~ 30041875 (-)
G15585 NA non-coding downstream 260188 29802895 ~ 29807133 (-)
G15525 NA non-coding downstream 802654 29261312 ~ 29264667 (-)
G15448 NA non-coding downstream 1000933 29066111 ~ 29066388 (-)
G15690 NA non-coding upstream 38229 30109453 ~ 30113284 (-)
G15708 NA non-coding upstream 133598 30204822 ~ 30205115 (-)
G15711 NA non-coding upstream 136463 30207687 ~ 30208537 (-)
G15716 NA non-coding upstream 162324 30233548 ~ 30236867 (-)
G15746 NA non-coding upstream 358705 30429929 ~ 30431998 (-)
AMCG00016740 ormdl3,LOC108273759,LOC107723636,LOC107657273,LOC107556587,LOC102217224,LOC106521946 other downstream 841734 29201872 ~ 29225587 (-)
AMCG00016732 NA other downstream 1281814 28781472 ~ 28785507 (-)
AMCG00016712 NA other downstream 1910121 28130012 ~ 28157200 (-)
G15076 NA other downstream 2638670 27424893 ~ 27428651 (-)
G15067 NA other downstream 2663399 27401676 ~ 27403922 (-)
G15706 NA other upstream 130235 30201459 ~ 30202351 (-)
G15787 NA other upstream 455068 30526292 ~ 30529500 (-)
AMCG00016815 NA other upstream 1309323 31380547 ~ 31388268 (-)
AMCG00016847 NA other upstream 2190325 32261549 ~ 32267968 (-)
G16247 NA other upstream 2351834 32423058 ~ 32423438 (-)

Expression


Co-expression Network